diff options
Diffstat (limited to 'man/multistart.Rd')
| -rw-r--r-- | man/multistart.Rd | 20 |
1 files changed, 19 insertions, 1 deletions
diff --git a/man/multistart.Rd b/man/multistart.Rd index 78ff4614..d20c0465 100644 --- a/man/multistart.Rd +++ b/man/multistart.Rd @@ -4,6 +4,10 @@ \alias{multistart} \alias{multistart.saem.mmkin} \alias{print.multistart} +\alias{best} +\alias{best.default} +\alias{which.best} +\alias{which.best.default} \title{Perform a hierarchical model fit with multiple starting values} \usage{ multistart( @@ -17,6 +21,14 @@ multistart( \method{multistart}{saem.mmkin}(object, n = 50, cores = 1, cluster = NULL, ...) \method{print}{multistart}(x, ...) + +best(object, ...) + +\method{best}{default}(object, ...) + +which.best(object, ...) + +\method{which.best}{default}(object, ...) } \arguments{ \item{object}{The fit object to work with} @@ -36,6 +48,10 @@ for parallel execution.} \value{ A list of \link{saem.mmkin} objects, with class attributes 'multistart.saem.mmkin' and 'multistart'. + +The object with the highest likelihood + +The index of the object with the highest likelihood } \description{ The purpose of this method is to check if a certain algorithm for fitting @@ -69,8 +85,10 @@ f_mmkin <- mmkin("DFOP", dmta_ds, error_model = "tc", cores = 7, quiet = TRUE) f_saem_full <- saem(f_mmkin) f_saem_full_multi <- multistart(f_saem_full, n = 16, cores = 16) parhist(f_saem_full_multi, lpos = "bottomright") +illparms(f_saem_full) -f_saem_reduced <- update(f_saem_full, covariance.model = diag(c(1, 1, 0, 1))) +f_saem_reduced <- update(f_saem_full, no_random_effect = "log_k2") +illparms(f_saem_reduced) # On Windows, we need to create a cluster first. When working with # such a cluster, we need to export the mmkin object to the cluster # nodes, as it is referred to when updating the saem object on the nodes. |