diff options
Diffstat (limited to 'man/parplot.Rd')
-rw-r--r-- | man/parplot.Rd | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/man/parplot.Rd b/man/parplot.Rd new file mode 100644 index 00000000..37c5841d --- /dev/null +++ b/man/parplot.Rd @@ -0,0 +1,46 @@ +% Generated by roxygen2: do not edit by hand +% Please edit documentation in R/parplot.R +\name{parplot} +\alias{parplot} +\alias{parplot.multistart.saem.mmkin} +\title{Plot parameter variability of multistart objects} +\usage{ +parplot(object, ...) + +\method{parplot}{multistart.saem.mmkin}( + object, + llmin = -Inf, + scale = c("best", "median"), + lpos = "bottomleft", + main = "", + ... +) +} +\arguments{ +\item{object}{The \link{multistart} object} + +\item{\dots}{Passed to \link{boxplot}} + +\item{llmin}{The minimum likelihood of objects to be shown} + +\item{scale}{By default, scale parameters using the best available fit. +If 'median', parameters are scaled using the median parameters from all fits.} + +\item{lpos}{Positioning of the legend.} + +\item{main}{Title of the plot} +} +\description{ +Produces a boxplot with all parameters from the multiple runs, scaled +either by the parameters of the run with the highest likelihood, +or by their medians as proposed in the paper by Duchesne et al. (2021). +} +\references{ +Duchesne R, Guillemin A, Gandrillon O, Crauste F. Practical +identifiability in the frame of nonlinear mixed effects models: the example +of the in vitro erythropoiesis. BMC Bioinformatics. 2021 Oct 4;22(1):478. +doi: 10.1186/s12859-021-04373-4. +} +\seealso{ +\link{multistart} +} |