diff options
Diffstat (limited to 'man')
-rw-r--r-- | man/DFOP.solution.Rd | 2 | ||||
-rw-r--r-- | man/FOMC.solution.Rd | 2 | ||||
-rw-r--r-- | man/HS.solution.Rd | 2 | ||||
-rw-r--r-- | man/mkinresplot.Rd | 13 | ||||
-rw-r--r-- | man/plot.mkinfit.Rd | 10 | ||||
-rw-r--r-- | man/plot.mmkin.Rd | 3 |
6 files changed, 12 insertions, 20 deletions
diff --git a/man/DFOP.solution.Rd b/man/DFOP.solution.Rd index 2d8b1735..2bf2a26c 100644 --- a/man/DFOP.solution.Rd +++ b/man/DFOP.solution.Rd @@ -31,6 +31,6 @@ DFOP.solution(t, parent.0, k1, k2, g) \url{http://focus.jrc.ec.europa.eu/dk}
}
\examples{
- \dontrun{plot(function(x) DFOP.solution(x, 100, 5, 0.5, 0.3), 0, 4, ylim=c(0,100))}
+ plot(function(x) DFOP.solution(x, 100, 5, 0.5, 0.3), 0, 4, ylim=c(0,100))
}
\keyword{ manip }
diff --git a/man/FOMC.solution.Rd b/man/FOMC.solution.Rd index f4a26e41..d9c4ccae 100644 --- a/man/FOMC.solution.Rd +++ b/man/FOMC.solution.Rd @@ -44,6 +44,6 @@ FOMC.solution(t, parent.0, alpha, beta) Technology} \bold{24}, 1032-1038
}
\examples{
- \dontrun{plot(function(x) FOMC.solution(x, 100, 10, 2), 0, 2, ylim = c(0, 100))}
+ plot(function(x) FOMC.solution(x, 100, 10, 2), 0, 2, ylim = c(0, 100))
}
\keyword{ manip }
diff --git a/man/HS.solution.Rd b/man/HS.solution.Rd index 71f68a1e..5666bb43 100644 --- a/man/HS.solution.Rd +++ b/man/HS.solution.Rd @@ -29,6 +29,6 @@ HS.solution(t, parent.0, k1, k2, tb) \url{http://focus.jrc.ec.europa.eu/dk}
}
\examples{
- \dontrun{plot(function(x) HS.solution(x, 100, 2, 0.3, 0.5), 0, 2, ylim=c(0,100))}
+ plot(function(x) HS.solution(x, 100, 2, 0.3, 0.5), 0, 2, ylim=c(0,100))
}
\keyword{ manip }
diff --git a/man/mkinresplot.Rd b/man/mkinresplot.Rd index 59d19274..eaa861f4 100644 --- a/man/mkinresplot.Rd +++ b/man/mkinresplot.Rd @@ -53,19 +53,12 @@ \author{
Johannes Ranke
}
-
\seealso{
\code{\link{mkinplot}}, for a way to plot the data and the fitted lines of the
mkinfit object. }
\examples{
-data <- mkin_wide_to_long(schaefer07_complex_case, time = "time")
-model <- mkinmod(
- parent = list(type = "SFO", to = c("A1", "B1", "C1"), sink = FALSE),
- A1 = list(type = "SFO", to = "A2"),
- B1 = list(type = "SFO"),
- C1 = list(type = "SFO"),
- A2 = list(type = "SFO"))
-\dontrun{fit <- mkinfit(model, data, plot=TRUE)}
-\dontrun{mkinresplot(fit, "A1")}
+model <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO"))
+fit <- mkinfit(model, FOCUS_2006_D)
+mkinresplot(fit, "m1")
}
\keyword{ hplot }
diff --git a/man/plot.mkinfit.Rd b/man/plot.mkinfit.Rd index 7009e7d7..816d7e1c 100644 --- a/man/plot.mkinfit.Rd +++ b/man/plot.mkinfit.Rd @@ -80,13 +80,11 @@ The function is called for its side effect. } \examples{ -# One parent compound, one metabolite, both single first order. -SFO_SFO <- mkinmod( - parent = list(type = "SFO", to = "m1", sink = TRUE), - m1 = list(type = "SFO")) -# Fit the model to the FOCUS example dataset D using defaults +# One parent compound, one metabolite, both single first order, path from +# parent to sink included +SFO_SFO <- mkinmod(parent = mkinsub("SFO", "m1"), m1 = mkinsub("SFO")) fit <- mkinfit(SFO_SFO, FOCUS_2006_D) -\dontrun{plot(fit)} +plot(fit) } \author{ Johannes Ranke diff --git a/man/plot.mmkin.Rd b/man/plot.mmkin.Rd index 4f78de2c..a715fdea 100644 --- a/man/plot.mmkin.Rd +++ b/man/plot.mmkin.Rd @@ -45,6 +45,7 @@ Johannes Ranke } \examples{ - fits <- mmkin(c("SFO", "FOMC"), list("FOCUS B" = FOCUS_2006_B, "FOCUS C" = FOCUS_2006_C)) + fits <- mmkin(c("SFO", "FOMC", "HS"), list("FOCUS B" = FOCUS_2006_B, "FOCUS C" = FOCUS_2006_C)) plot(fits[, "FOCUS C"]) + plot(fits["FOMC", ]) } |