diff options
Diffstat (limited to 'test.log')
| -rw-r--r-- | test.log | 69 |
1 files changed, 38 insertions, 31 deletions
@@ -1,37 +1,44 @@ ℹ Loading mkin Loading required package: parallel ℹ Testing mkin -✔ | OK F W S | Context -✔ | 5 | AIC calculation -✔ | 5 | Analytical solutions for coupled models [3.1 s] -✔ | 5 | Calculation of Akaike weights -✔ | 2 | Export dataset for reading into CAKE -✔ | 12 | Confidence intervals and p-values [1.3 s] -✔ | 14 | Error model fitting [4.0 s] -✔ | 5 | Time step normalisation -✔ | 4 | Calculation of FOCUS chi2 error levels [0.5 s] -✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [0.7 s] -✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3 s] -✔ | 1 | Fitting the logistic model [0.2 s] -✔ | 5 | Nonlinear mixed-effects models [0.1 s] -✔ | 2 | Test dataset classes mkinds and mkindsg -✔ | 10 | Special cases of mkinfit calls [0.3 s] -✔ | 1 | mkinfit features [0.3 s] -✔ | 8 | mkinmod model generation and printing [0.2 s] -✔ | 3 | Model predictions with mkinpredict [0.4 s] -✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.3 s] -✔ | 9 | Nonlinear mixed-effects models [7.7 s] -✔ | 14 | Plotting [1.1 s] -✔ | 4 | Residuals extracted from mkinfit models -✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.4 s] -✔ | 7 | Fitting the SFORB model [3.5 s] -✔ | 1 | Summaries of old mkinfit objects -✔ | 4 | Summary [0.1 s] -✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.1 s] -✔ | 9 | Hypothesis tests [7.9 s] -✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.2 s] +✔ | F W S OK | Context +✔ | 5 | AIC calculation +✔ | 5 | Analytical solutions for coupled models [3.5s] +✔ | 5 | Calculation of Akaike weights +✔ | 2 | Export dataset for reading into CAKE +✔ | 12 | Confidence intervals and p-values [1.0s] +✔ | 14 | Error model fitting [5.0s] +✔ | 5 | Time step normalisation +✔ | 4 | Calculation of FOCUS chi2 error levels [0.6s] +✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [0.8s] +✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3s] +✔ | 1 | Fitting the logistic model [0.2s] +✔ | 1 35 | Nonlinear mixed-effects models [26.8s] +──────────────────────────────────────────────────────────────────────────────── +Skip (test_mixed.R:161:3): saem results are reproducible for biphasic fits +Reason: Fitting with saemix takes around 10 minutes when using deSolve +──────────────────────────────────────────────────────────────────────────────── +✔ | 2 | Test dataset classes mkinds and mkindsg +✔ | 10 | Special cases of mkinfit calls [0.4s] +✔ | 1 | mkinfit features [0.4s] +✔ | 8 | mkinmod model generation and printing [0.2s] +✔ | 3 | Model predictions with mkinpredict [0.3s] +✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.5s] +✔ | 9 | Nonlinear mixed-effects models with nlme [8.2s] +✔ | 16 | Plotting [1.3s] +✔ | 4 | Residuals extracted from mkinfit models +✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5s] +✔ | 7 | Fitting the SFORB model [3.8s] +✔ | 1 | Summaries of old mkinfit objects +✔ | 4 | Summary [0.1s] +✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.3s] +✔ | 9 | Hypothesis tests [8.6s] +✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.2s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 38.8 s +Duration: 69.5 s -[ FAIL 0 | WARN 0 | SKIP 0 | PASS 174 ] +── Skipped tests ────────────────────────────────────────────────────────────── +• Fitting with saemix takes around 10 minutes when using deSolve (1) + +[ FAIL 0 | WARN 0 | SKIP 1 | PASS 206 ] |