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Diffstat (limited to 'test.log')
| -rw-r--r-- | test.log | 40 |
1 files changed, 23 insertions, 17 deletions
@@ -2,48 +2,54 @@ Loading mkin Loading required package: parallel Testing mkin ✔ | OK F W S | Context -✔ | 4 | AIC calculation +✔ | 5 | AIC calculation ✔ | 2 | Export dataset for reading into CAKE -✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [0.9 s] -✔ | 4 | Calculation of FOCUS chi2 error levels [0.4 s] +✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.0 s] +✔ | 4 | Calculation of FOCUS chi2 error levels [0.5 s] ✔ | 7 | Fitting the SFORB model [3.5 s] -✔ | 5 | Analytical solutions for coupled models [3.1 s] +✔ | 5 | Analytical solutions for coupled models [3.2 s] ✔ | 5 | Calculation of Akaike weights -✔ | 10 | Confidence intervals and p-values [1.0 s] -✔ | 14 | Error model fitting [4.7 s] +✔ | 14 | Confidence intervals and p-values [1.2 s] +✔ | 14 | Error model fitting [4.5 s] ✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3 s] ✔ | 1 | Fitting the logistic model [0.2 s] ✔ | 1 | Test dataset class mkinds used in gmkin ✔ | 1 | mkinfit features [0.3 s] ✔ | 12 | Special cases of mkinfit calls [0.7 s] -✔ | 8 | mkinmod model generation and printing [0.3 s] +✔ | 8 | mkinmod model generation and printing [0.2 s] ✔ | 3 | Model predictions with mkinpredict [0.4 s] -✔ | 14 2 | Evaluations according to 2015 NAFTA guidance [1.2 s] +✔ | 14 2 | Evaluations according to 2015 NAFTA guidance [1.3 s] ──────────────────────────────────────────────────────────────────────────────── -Skip (test_nafta.R:26:5): Test data from Appendix B are correctly evaluated +Skip (test_nafta.R:25:5): Test data from Appendix B are correctly evaluated Reason: getRversion() < "4.1.0" is TRUE -Skip (test_nafta.R:55:5): Test data from Appendix D are correctly evaluated +Skip (test_nafta.R:53:5): Test data from Appendix D are correctly evaluated Reason: getRversion() < "4.1.0" is TRUE ──────────────────────────────────────────────────────────────────────────────── -✔ | 9 | Nonlinear mixed-effects models [8.0 s] +✔ | 9 | Nonlinear mixed-effects models [7.9 s] ✔ | 0 1 | Plotting [0.7 s] ──────────────────────────────────────────────────────────────────────────────── -Skip (test_plot.R:25:3): Plotting mkinfit and mmkin objects is reproducible +Skip (test_plot.R:28:3): Plotting mkinfit and mmkin objects is reproducible Reason: getRversion() < "4.1.0" is TRUE ──────────────────────────────────────────────────────────────────────────────── ✔ | 4 | Residuals extracted from mkinfit models -✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.7 s] -✔ | 4 | Summary [0.2 s] +✔ | 13 1 | Nonlinear mixed effects models fitted with SAEM from saemix [19.0 s] +──────────────────────────────────────────────────────────────────────────────── +Skip (test_saem.R:103:1): Simple models with metabolite can be fitted with saemix +Reason: empty test +──────────────────────────────────────────────────────────────────────────────── +✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5 s] +✔ | 4 | Summary [0.1 s] ✔ | 1 | Summaries of old mkinfit objects ✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.3 s] -✔ | 9 | Hypothesis tests [7.2 s] +✔ | 9 | Hypothesis tests [7.3 s] ✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.4 s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 39.8 s +Duration: 59.7 s ── Skipped tests ────────────────────────────────────────────────────────────── +● empty test (1) ● getRversion() < "4.1.0" is TRUE (3) -[ FAIL 0 | WARN 0 | SKIP 3 | PASS 146 ] +[ FAIL 0 | WARN 0 | SKIP 4 | PASS 164 ] |