diff options
Diffstat (limited to 'test.log')
| -rw-r--r-- | test.log | 38 |
1 files changed, 10 insertions, 28 deletions
@@ -3,14 +3,15 @@ Loading required package: parallel Testing mkin ✔ | OK F W S | Context ✔ | 5 | AIC calculation -✔ | 2 | Export dataset for reading into CAKE +✔ | 2 | Export dataset for reading into CAKE [0.2 s] ✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.0 s] ✔ | 4 | Calculation of FOCUS chi2 error levels [0.5 s] ✔ | 7 | Fitting the SFORB model [3.5 s] ✔ | 5 | Analytical solutions for coupled models [3.2 s] ✔ | 5 | Calculation of Akaike weights ✔ | 14 | Confidence intervals and p-values [1.2 s] -✔ | 14 | Error model fitting [4.5 s] +✔ | 14 | Error model fitting [4.6 s] +✔ | 1 | Time step normalisation ✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3 s] ✔ | 1 | Fitting the logistic model [0.2 s] ✔ | 1 | Test dataset class mkinds used in gmkin @@ -18,38 +19,19 @@ Testing mkin ✔ | 12 | Special cases of mkinfit calls [0.7 s] ✔ | 8 | mkinmod model generation and printing [0.2 s] ✔ | 3 | Model predictions with mkinpredict [0.4 s] -✔ | 14 2 | Evaluations according to 2015 NAFTA guidance [1.3 s] -──────────────────────────────────────────────────────────────────────────────── -Skip (test_nafta.R:25:5): Test data from Appendix B are correctly evaluated -Reason: getRversion() < "4.1.0" is TRUE - -Skip (test_nafta.R:53:5): Test data from Appendix D are correctly evaluated -Reason: getRversion() < "4.1.0" is TRUE -──────────────────────────────────────────────────────────────────────────────── -✔ | 9 | Nonlinear mixed-effects models [7.9 s] -✔ | 0 1 | Plotting [0.7 s] -──────────────────────────────────────────────────────────────────────────────── -Skip (test_plot.R:28:3): Plotting mkinfit and mmkin objects is reproducible -Reason: getRversion() < "4.1.0" is TRUE -──────────────────────────────────────────────────────────────────────────────── +✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.6 s] +✔ | 9 | Nonlinear mixed-effects models [7.7 s] +✔ | 18 | Plotting [2.1 s] ✔ | 4 | Residuals extracted from mkinfit models -✔ | 13 1 | Nonlinear mixed effects models fitted with SAEM from saemix [19.0 s] -──────────────────────────────────────────────────────────────────────────────── -Skip (test_saem.R:103:1): Simple models with metabolite can be fitted with saemix -Reason: empty test -──────────────────────────────────────────────────────────────────────────────── +✔ | 17 | Nonlinear mixed effects models fitted with SAEM from saemix [19.1 s] ✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5 s] ✔ | 4 | Summary [0.1 s] ✔ | 1 | Summaries of old mkinfit objects ✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.3 s] -✔ | 9 | Hypothesis tests [7.3 s] +✔ | 9 | Hypothesis tests [7.4 s] ✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.4 s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 59.7 s - -── Skipped tests ────────────────────────────────────────────────────────────── -● empty test (1) -● getRversion() < "4.1.0" is TRUE (3) +Duration: 62.0 s -[ FAIL 0 | WARN 0 | SKIP 4 | PASS 164 ] +[ FAIL 0 | WARN 0 | SKIP 0 | PASS 189 ] |