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Diffstat (limited to 'test.log')
| -rw-r--r-- | test.log | 53 |
1 files changed, 20 insertions, 33 deletions
@@ -4,47 +4,34 @@ Testing mkin ✔ | OK F W S | Context ✔ | 5 | AIC calculation ✔ | 2 | Export dataset for reading into CAKE -✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.1 s] +✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.0 s] ✔ | 4 | Calculation of FOCUS chi2 error levels [0.5 s] -✔ | 7 | Fitting the SFORB model [4.0 s] -✔ | 5 | Analytical solutions for coupled models [3.6 s] +✔ | 7 | Fitting the SFORB model [3.5 s] +✔ | 5 | Analytical solutions for coupled models [3.3 s] ✔ | 5 | Calculation of Akaike weights -✔ | 14 | Confidence intervals and p-values [1.4 s] -✔ | 14 | Error model fitting [6.8 s] +✔ | 14 | Confidence intervals and p-values [1.2 s] +✔ | 14 | Error model fitting [4.4 s] ✔ | 5 | Time step normalisation -✔ | 4 | Test fitting the decline of metabolites from their maximum [0.5 s] -✔ | 1 | Fitting the logistic model [0.3 s] -✔ | 5 3 | Nonlinear mixed-effects models [0.1 s] -──────────────────────────────────────────────────────────────────────────────── -Skip (test_mixed.R:4:3): Parent fits using saemix are correctly implemented -Reason: !saemix_available is TRUE - -Skip (test_mixed.R:94:3): Print methods work -Reason: !saemix_available is TRUE - -Skip (test_mixed.R:118:3): saem results are reproducible for biphasic fits -Reason: !saemix_available is TRUE -──────────────────────────────────────────────────────────────────────────────── +✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3 s] +✔ | 1 | Fitting the logistic model [0.2 s] +✔ | 5 | Nonlinear mixed-effects models [0.1 s] ✔ | 2 | Test dataset classes mkinds and mkindsg -✔ | 1 | mkinfit features [0.4 s] -✔ | 10 | Special cases of mkinfit calls [0.4 s] +✔ | 1 | mkinfit features [0.3 s] +✔ | 10 | Special cases of mkinfit calls [0.3 s] ✔ | 8 | mkinmod model generation and printing [0.2 s] ✔ | 3 | Model predictions with mkinpredict [0.4 s] -✔ | 16 | Evaluations according to 2015 NAFTA guidance [2.0 s] -✔ | 9 | Nonlinear mixed-effects models [9.3 s] -✔ | 14 | Plotting [2.0 s] +✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.6 s] +✔ | 9 | Nonlinear mixed-effects models [7.7 s] +✔ | 14 | Plotting [1.7 s] ✔ | 4 | Residuals extracted from mkinfit models -✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.8 s] -✔ | 4 | Summary [0.2 s] +✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5 s] +✔ | 4 | Summary [0.1 s] ✔ | 1 | Summaries of old mkinfit objects -✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.5 s] -✔ | 9 | Hypothesis tests [7.9 s] -✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.7 s] +✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.3 s] +✔ | 9 | Hypothesis tests [7.2 s] +✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.4 s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 48.3 s - -── Skipped tests ────────────────────────────────────────────────────────────── -● !saemix_available is TRUE (3) +Duration: 40.4 s -[ FAIL 0 | WARN 0 | SKIP 3 | PASS 176 ] +[ FAIL 0 | WARN 0 | SKIP 0 | PASS 176 ] |