diff options
Diffstat (limited to 'test.log')
| -rw-r--r-- | test.log | 45 |
1 files changed, 26 insertions, 19 deletions
@@ -3,35 +3,42 @@ Loading required package: parallel Testing mkin ✔ | OK F W S | Context ✔ | 5 | AIC calculation -✔ | 2 | Export dataset for reading into CAKE [0.2 s] +✔ | 2 | Export dataset for reading into CAKE ✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.0 s] ✔ | 4 | Calculation of FOCUS chi2 error levels [0.5 s] -✔ | 7 | Fitting the SFORB model [3.4 s] -✔ | 5 | Analytical solutions for coupled models [3.1 s] +✔ | 7 | Fitting the SFORB model [3.6 s] +✔ | 5 | Analytical solutions for coupled models [3.3 s] ✔ | 5 | Calculation of Akaike weights -✔ | 12 | Confidence intervals and p-values [1.1 s] -✔ | 14 | Error model fitting [4.1 s] +✔ | 12 | Confidence intervals and p-values [1.0 s] +✔ | 14 | Error model fitting [4.6 s] ✔ | 5 | Time step normalisation ✔ | 4 | Test fitting the decline of metabolites from their maximum [0.3 s] ✔ | 1 | Fitting the logistic model [0.2 s] -✔ | 5 | Nonlinear mixed-effects models [0.1 s] +✔ | 34 1 | Nonlinear mixed-effects models [40.8 s] +──────────────────────────────────────────────────────────────────────────────── +Skip (test_mixed.R:150:3): saem results are reproducible for biphasic fits +Reason: Fitting with saemix takes around 10 minutes when using deSolve +──────────────────────────────────────────────────────────────────────────────── ✔ | 2 | Test dataset classes mkinds and mkindsg -✔ | 1 | mkinfit features [0.3 s] -✔ | 10 | Special cases of mkinfit calls [0.3 s] -✔ | 8 | mkinmod model generation and printing [0.2 s] -✔ | 3 | Model predictions with mkinpredict [0.3 s] -✔ | 16 | Evaluations according to 2015 NAFTA guidance [1.6 s] -✔ | 9 | Nonlinear mixed-effects models [7.9 s] -✔ | 14 | Plotting [1.7 s] +✔ | 1 | mkinfit features [0.5 s] +✔ | 10 | Special cases of mkinfit calls [0.6 s] +✔ | 8 | mkinmod model generation and printing [0.4 s] +✔ | 3 | Model predictions with mkinpredict [0.7 s] +✔ | 16 | Evaluations according to 2015 NAFTA guidance [3.1 s] +✔ | 9 | Nonlinear mixed-effects models [14.5 s] +✔ | 16 | Plotting [2.1 s] ✔ | 4 | Residuals extracted from mkinfit models -✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.5 s] -✔ | 4 | Summary [0.1 s] +✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.7 s] +✔ | 4 | Summary [0.2 s] ✔ | 1 | Summaries of old mkinfit objects -✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.2 s] -✔ | 9 | Hypothesis tests [8.3 s] +✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.3 s] +✔ | 9 | Hypothesis tests [8.4 s] ✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.5 s] ══ Results ═════════════════════════════════════════════════════════════════════ -Duration: 40.9 s +Duration: 92.7 s -[ FAIL 0 | WARN 0 | SKIP 0 | PASS 174 ] +── Skipped tests ────────────────────────────────────────────────────────────── +● Fitting with saemix takes around 10 minutes when using deSolve (1) + +[ FAIL 0 | WARN 0 | SKIP 1 | PASS 205 ] |