aboutsummaryrefslogtreecommitdiff
path: root/test.log
diff options
context:
space:
mode:
Diffstat (limited to 'test.log')
-rw-r--r--test.log28
1 files changed, 17 insertions, 11 deletions
diff --git a/test.log b/test.log
index 5c8f1802..b044e6a0 100644
--- a/test.log
+++ b/test.log
@@ -3,45 +3,51 @@ Loading required package: parallel
ℹ Testing mkin
✔ | F W S OK | Context
✔ | 5 | AIC calculation
-✔ | 5 | Analytical solutions for coupled models [3.4s]
+✔ | 5 | Analytical solutions for coupled models [4.3s]
✔ | 5 | Calculation of Akaike weights
✔ | 2 | Export dataset for reading into CAKE
-✔ | 12 | Confidence intervals and p-values [1.0s]
+✔ | 12 | Confidence intervals and p-values [1.1s]
⠋ | 1 | Dimethenamid data from 2018
-✔ | 24 | Dimethenamid data from 2018 [37.1s]
-✔ | 14 | Error model fitting [6.8s]
+✔ | 1 25 | Dimethenamid data from 2018 [49.7s]
+────────────────────────────────────────────────────────────────────────────────
+Skip (test_dmta.R:147:3): Different backends get consistent results for SFO-SFO3+, dimethenamid data
+Reason: Fitting this ODE model with saemix takes about 15 minutes on my system
+────────────────────────────────────────────────────────────────────────────────
+✔ | 14 | Error model fitting [7.0s]
✔ | 5 | Time step normalisation
✔ | 4 | Calculation of FOCUS chi2 error levels [0.8s]
✔ | 14 | Results for FOCUS D established in expertise for UBA (Ranke 2014) [1.1s]
✔ | 4 | Test fitting the decline of metabolites from their maximum [0.5s]
✔ | 1 | Fitting the logistic model [0.3s]
-✔ | 1 12 | Nonlinear mixed-effects models [0.2s]
+⠴ | 6 | Nonlinear mixed-effects models
+✔ | 1 15 | Nonlinear mixed-effects models [2.4s]
────────────────────────────────────────────────────────────────────────────────
Skip (test_mixed.R:67:3): saemix results are reproducible for biphasic fits
Reason: Fitting with saemix takes around 10 minutes when using deSolve
────────────────────────────────────────────────────────────────────────────────
-✔ | 2 | Test dataset classes mkinds and mkindsg
+✔ | 3 | Test dataset classes mkinds and mkindsg
✔ | 10 | Special cases of mkinfit calls [0.6s]
✔ | 1 | mkinfit features [0.5s]
✔ | 8 | mkinmod model generation and printing [0.2s]
✔ | 3 | Model predictions with mkinpredict [0.4s]
✔ | 16 | Evaluations according to 2015 NAFTA guidance [2.1s]
-✔ | 9 | Nonlinear mixed-effects models with nlme [9.0s]
+✔ | 9 | Nonlinear mixed-effects models with nlme [9.2s]
✔ | 16 | Plotting [1.5s]
✔ | 4 | Residuals extracted from mkinfit models
-✔ | 23 | saemix_parent [29.0s]
+✔ | 23 | saemix_parent [30.4s]
✔ | 2 | Complex test case from Schaefer et al. (2007) Piacenza paper [1.6s]
✔ | 7 | Fitting the SFORB model [4.5s]
✔ | 1 | Summaries of old mkinfit objects
✔ | 4 | Summary [0.1s]
-✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.5s]
+✔ | 4 | Results for synthetic data established in expertise for UBA (Ranke 2014) [2.6s]
✔ | 9 | Hypothesis tests [9.4s]
✔ | 4 | Calculation of maximum time weighted average concentrations (TWAs) [2.2s]
══ Results ═════════════════════════════════════════════════════════════════════
-Duration: 115.2 s
+Duration: 133.2 s
── Skipped tests ──────────────────────────────────────────────────────────────
+• Fitting this ODE model with saemix takes about 15 minutes on my system (1)
• Fitting with saemix takes around 10 minutes when using deSolve (1)
-[ FAIL 0 | WARN 0 | SKIP 1 | PASS 230 ]
+[ FAIL 0 | WARN 0 | SKIP 2 | PASS 235 ]

Contact - Imprint