diff options
Diffstat (limited to 'tests/testthat/slow/test_roundtrip_error_parameters.R')
| -rw-r--r-- | tests/testthat/slow/test_roundtrip_error_parameters.R | 45 |
1 files changed, 33 insertions, 12 deletions
diff --git a/tests/testthat/slow/test_roundtrip_error_parameters.R b/tests/testthat/slow/test_roundtrip_error_parameters.R index 97510563..7fa6c4e1 100644 --- a/tests/testthat/slow/test_roundtrip_error_parameters.R +++ b/tests/testthat/slow/test_roundtrip_error_parameters.R @@ -1,3 +1,36 @@ +# Copyright (C) 2018,2019 Johannes Ranke +# Contact: jranke@uni-bremen.de + +# This file is part of the R package mkin + +# mkin is free software: you can redistribute it and/or modify it under the +# terms of the GNU General Public License as published by the Free Software +# Foundation, either version 3 of the License, or (at your option) any later +# version. + +# This program is distributed in the hope that it will be useful, but WITHOUT +# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS +# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more +# details. + +# You should have received a copy of the GNU General Public License along with +# this program. If not, see <http://www.gnu.org/licenses/> + +context("Roundtripping error model parameters") + +# Per default (on my box where I set NOT_CRAN) use all cores minus one +if (identical(Sys.getenv("NOT_CRAN"), "true")) { + n_cores <- parallel::detectCores() - 1 +} else { + n_cores <- 1 +} + +# We are only allowed one core on travis, but they also set NOT_CRAN=true +if (Sys.getenv("TRAVIS") != "") n_cores = 1 + +# On Windows we would need to make a cluster first +if (Sys.info()["sysname"] == "Windows") n_cores = 1 + test_that("Reweighting method 'tc' produces reasonable variance estimates", { # Check if we can approximately obtain the parameters and the error model @@ -19,18 +52,6 @@ test_that("Reweighting method 'tc' produces reasonable variance estimates", { sdfunc = function(x) sigma_twocomp(x, 0.5, 0.07), n = 1, reps = 100, digits = 5, LOD = -Inf, seed = 123456) - # Per default (on my box where I set NOT_CRAN) use all cores minus one - if (identical(Sys.getenv("NOT_CRAN"), "true")) { - n_cores <- parallel::detectCores() - 1 - } else { - n_cores <- 1 - } - - # We are only allowed one core on travis, but they also set NOT_CRAN=true - if (Sys.getenv("TRAVIS") != "") n_cores = 1 - - # On Windows we would need to make a cluster first - if (Sys.info()["sysname"] == "Windows") n_cores = 1 # Unweighted fits f_2_10 <- mmkin("DFOP", d_2_10, error_model = "const", quiet = TRUE, |