diff options
Diffstat (limited to 'tests/testthat/test_FOCUS_D_UBA_expertise.R')
| -rw-r--r-- | tests/testthat/test_FOCUS_D_UBA_expertise.R | 10 |
1 files changed, 4 insertions, 6 deletions
diff --git a/tests/testthat/test_FOCUS_D_UBA_expertise.R b/tests/testthat/test_FOCUS_D_UBA_expertise.R index be2806de..101c8e15 100644 --- a/tests/testthat/test_FOCUS_D_UBA_expertise.R +++ b/tests/testthat/test_FOCUS_D_UBA_expertise.R @@ -2,11 +2,10 @@ context("Results for FOCUS D established in expertise for UBA (Ranke 2014)") # Results are from p. 40 -# Avoid warnings due to the zero value in the data for m1 at time zero -FOCUS_D <- subset(FOCUS_2006_D, value != 0) - test_that("Fits without formation fractions are correct for FOCUS D", { - fit.noff <- mkinfit(SFO_SFO, FOCUS_D, quiet = TRUE) + expect_warning( + fit.noff <- mkinfit(SFO_SFO, FOCUS_D, quiet = TRUE), + "p-value.*Shapiro-Wilk") expect_equal(round(as.numeric(endpoints(fit.noff)$distimes["parent", ]), 2), c(7.02, 23.33)) @@ -16,8 +15,7 @@ test_that("Fits without formation fractions are correct for FOCUS D", { }) test_that("Fits with formation fractions are correct for FOCUS D", { - skip_on_cran() - fit.ff <- mkinfit(SFO_SFO.ff, FOCUS_D, quiet = TRUE) + fit.ff <- f_sfo_sfo.ff expect_equivalent(round(fit.ff$bparms.optim, c(2, 4, 4, 4)), c(99.60, 0.0987, 0.0053, 0.5145)) |