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Diffstat (limited to 'tests/testthat/test_multistart.R')
-rw-r--r-- | tests/testthat/test_multistart.R | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/tests/testthat/test_multistart.R b/tests/testthat/test_multistart.R new file mode 100644 index 00000000..56eb140c --- /dev/null +++ b/tests/testthat/test_multistart.R @@ -0,0 +1,38 @@ +context("Multistart method for saem.mmkin models") + +test_that("multistart works for saem.mmkin models", { + set.seed(123456) + saem_sfo_s_multi <- multistart(sfo_saem_1_reduced, n = 8, cores = n_cores, + no_random_effect = "parent_0") + anova_sfo <- anova(sfo_saem_1, + sfo_saem_1_reduced, + best(saem_sfo_s_multi), + test = TRUE + ) + expect_true(anova_sfo[3, "Pr(>Chisq)"] > 0.5) + + skip_on_cran() # Save CRAN time + set.seed(123456) + saem_biphasic_m_multi <- multistart(saem_biphasic_m, n = 8, + cores = n_cores) + expect_known_output(print(saem_biphasic_m_multi), + file = "print_multistart_biphasic.txt") + + anova_biphasic <- anova(saem_biphasic_m, + best(saem_biphasic_m_multi)) + + expect_true(anova_biphasic[2, "AIC"] < anova_biphasic[1, "AIC"]) + skip_on_travis() # Plots are platform dependent + + llhist_sfo <- function() llhist(saem_sfo_s_multi) + parplot_sfo <- function() parplot(saem_sfo_s_multi, ylim = c(0.5, 2)) + vdiffr::expect_doppelganger("llhist for sfo fit", llhist_sfo) + vdiffr::expect_doppelganger("parplot for sfo fit", parplot_sfo) + + llhist_biphasic <- function() llhist(saem_biphasic_m_multi) + parplot_biphasic <- function() parplot(saem_biphasic_m_multi, + ylim = c(0.5, 2)) + + vdiffr::expect_doppelganger("llhist for biphasic saemix fit", llhist_biphasic) + vdiffr::expect_doppelganger("parplot for biphasic saemix fit", parplot_biphasic) +}) |