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-rw-r--r--tests/testthat/summary_DFOP_FOCUS_C.txt7
-rw-r--r--tests/testthat/summary_DFOP_FOCUS_D_eigen.txt13
-rw-r--r--tests/testthat/test_plots_summary_twa.R5
3 files changed, 5 insertions, 20 deletions
diff --git a/tests/testthat/summary_DFOP_FOCUS_C.txt b/tests/testthat/summary_DFOP_FOCUS_C.txt
index 90ce82e2..14e00f62 100644
--- a/tests/testthat/summary_DFOP_FOCUS_C.txt
+++ b/tests/testthat/summary_DFOP_FOCUS_C.txt
@@ -42,12 +42,7 @@ g_ilr 1.2490 0.05811 1.0870 1.4100
sigma 0.6962 0.16410 0.2406 1.1520
Parameter correlation:
- parent_0 log_k1 log_k2 g_ilr sigma
-parent_0 1e+00 4e-01 9e-02 -3e-02 5e-07
-log_k1 4e-01 1e+00 5e-01 -7e-01 4e-07
-log_k2 9e-02 5e-01 1e+00 -8e-01 -1e-07
-g_ilr -3e-02 -7e-01 -8e-01 1e+00 -2e-08
-sigma 5e-07 4e-07 -1e-07 -2e-08 1e+00
+NULL
Backtransformed parameters:
Confidence intervals for internally transformed parameters are asymmetric.
diff --git a/tests/testthat/summary_DFOP_FOCUS_D_eigen.txt b/tests/testthat/summary_DFOP_FOCUS_D_eigen.txt
index b570a15e..1626c5da 100644
--- a/tests/testthat/summary_DFOP_FOCUS_D_eigen.txt
+++ b/tests/testthat/summary_DFOP_FOCUS_D_eigen.txt
@@ -42,18 +42,7 @@ log_k_m1_sink -5.248 0.13320 -5.518 -4.977
sigma 3.126 0.35850 2.396 3.855
Parameter correlation:
- parent_0 log_k_parent_sink log_k_parent_m1 log_k_m1_sink
-parent_0 1e+00 6e-01 -6e-02 -2e-01
-log_k_parent_sink 6e-01 1e+00 -9e-02 -6e-01
-log_k_parent_m1 -6e-02 -9e-02 1e+00 5e-01
-log_k_m1_sink -2e-01 -6e-01 5e-01 1e+00
-sigma 1e-09 6e-10 3e-08 1e-09
- sigma
-parent_0 1e-09
-log_k_parent_sink 6e-10
-log_k_parent_m1 3e-08
-log_k_m1_sink 1e-09
-sigma 1e+00
+NULL
Backtransformed parameters:
Confidence intervals for internally transformed parameters are asymmetric.
diff --git a/tests/testthat/test_plots_summary_twa.R b/tests/testthat/test_plots_summary_twa.R
index 306a585c..9c802b00 100644
--- a/tests/testthat/test_plots_summary_twa.R
+++ b/tests/testthat/test_plots_summary_twa.R
@@ -56,7 +56,7 @@ test_that("Summaries are reproducible", {
# The correlation matrix is quite platform dependent
# It differs between i386 and amd64 on Windows
# and between Travis and my own Linux system
- test_summary$Corr <- signif(test_summary$Corr, 1)
+ test_summary$Corr <- NULL
expect_known_output(print(test_summary), "summary_DFOP_FOCUS_C.txt")
test_summary_2 <- summary(f_sfo_sfo_eigen)
@@ -69,7 +69,8 @@ test_that("Summaries are reproducible", {
# The correlation matrix is quite platform dependent
# It differs between i386 and amd64 on Windows
# and between Travis and my own Linux system
- test_summary_2$Corr <- signif(test_summary_2$Corr, 1)
+ # Even more so when using the Eigen method
+ test_summary_2$Corr <- NULL
expect_known_output(print(test_summary_2), "summary_DFOP_FOCUS_D_eigen.txt")
test_summary_3 <- summary(f_sfo_sfo_desolve)

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