diff options
Diffstat (limited to 'vignettes/prebuilt/2022_dmta_pathway.rmd')
-rw-r--r-- | vignettes/prebuilt/2022_dmta_pathway.rmd | 21 |
1 files changed, 17 insertions, 4 deletions
diff --git a/vignettes/prebuilt/2022_dmta_pathway.rmd b/vignettes/prebuilt/2022_dmta_pathway.rmd index ff2b527c..f787daf2 100644 --- a/vignettes/prebuilt/2022_dmta_pathway.rmd +++ b/vignettes/prebuilt/2022_dmta_pathway.rmd @@ -45,10 +45,17 @@ library(knitr) library(saemix) library(parallel) n_cores <- detectCores() -if (Sys.info()["sysname"] == "Windows") { - cl <- makePSOCKcluster(n_cores) -} else { - cl <- makeForkCluster(n_cores) + +# We need to start a new cluster after defining a compiled model that is +# saved as a DLL to the user directory, therefore we define a function +# This is used again after defining the pathway model +start_cluster <- function(n_cores) { + if (Sys.info()["sysname"] == "Windows") { + ret <- makePSOCKcluster(n_cores) + } else { + ret <- makeForkCluster(n_cores) + } + return(ret) } ``` @@ -163,6 +170,8 @@ m_hs_path_1 <- mkinmod( unload = TRUE, overwrite = TRUE, quiet = TRUE ) +cl <- start_cluster(n_cores) + deg_mods_1 <- list( sfo_path_1 = m_sfo_path_1, fomc_path_1 = m_fomc_path_1, @@ -332,6 +341,10 @@ plot(saem_sforb_path_1_tc_reduced) Plots of the remaining fits and listings for all successful fits are shown in the Appendix. +```{r} +stopCluster(cl) +``` + # Conclusions |