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2020-10-08Fix another URL, add devcheck targetv0.9.50.3Johannes Ranke1-0/+1
2020-10-08Fix issues for releaseJohannes Ranke1-0/+1
2020-05-12Update .Rbuildignorev0.9.50.2Johannes Ranke1-0/+1
2020-05-11Release to CRANv0.9.50.1Johannes Ranke1-0/+1
2019-10-21Refactor mkinfit, infrastructure workJohannes Ranke1-0/+1
mkinfit objects now include an ll() function to calculate the log-likelihood. Part of the code was refactored, hopefully making it easier to read and maintain. IRLS is currently the default algorithm for the error model "obs", for no particular reason. This may be subject to change when I get around to investigate. Slow tests are now in a separate subdirectory and will probably only be run by my own Makefile target. Formatting of test logs is improved. Roundtripping error model parameters works with a precision of 10% when we use lots of replicates in the synthetic data (see slow tests). This is not new in this commit, but as I think it is reasonable this closes #7.
2019-05-07After the OLS step, use OLS parameter estimatesJohannes Ranke1-0/+1
- Fix the respective error in the code - Static documentation rebuilt by pkgdown
2019-05-02Prepare for CRAN releaseJohannes Ranke1-0/+1
- Skip long running tests on CRAN as well to avoid timeout on winbuilder - Don't install benchmark results in the package, they are only needed in the git repository - Don't run example in man/add_err.Rd as it takes > 10 s on winbuilder - Rebuild docs
2019-03-04Fix .RbuildignoreJohannes Ranke1-14/+13
thanks to Kurt Hornik for pointing out that perl regexp syntax is needed, not shell glob syntax
2018-09-15Ignore .travis.yml, add build statusJohannes Ranke1-0/+1
2018-07-18Correct references to the Rocke and Lorenzato modelJohannes Ranke1-0/+1
Rename 'sigma_rl' to 'sigma_twocomp' as the Rocke and Lorenzato model assumes lognormal distribution for large y. Rebuild static documentation.
2018-03-09Another rebuild of the static docsJohannes Ranke1-2/+2
Now with rbenchmark installed, to get results for the compiled_models vignette
2016-12-08Documentation and Makefile improvementsJohannes Ranke1-0/+1
- Fix the remaining links to static docs on r-forge in README - Build mkin_*.tar.gz packages in current directory - check and test (test.log unchanged)
2016-12-07Use latex in plots when using tikzDeviceJohannes Ranke1-0/+1
2016-11-17Satisfy CRAN checks, also on R-develJohannes Ranke1-1/+2
- Use https for canonical R URLs - Update CAKE URL to one giving a valid SSL certificate
2016-11-17Remove trailing whitespace, clean headersJohannes Ranke1-0/+1
Also ignore test.R in the top level directory, as it is not meant to be public
2016-10-13Cleaning up a bitJohannes Ranke1-8/+6
2015-11-09Rebuild vignettes and static documentationJohannes Ranke1-2/+2
2015-10-02Some maintenanceJohannes Ranke1-19/+19
2015-08-22Generate README.html for my cgit setup on jrwb.deJohannes Ranke1-1/+1
2015-07-22index.r for grouping help topics in static documentationJohannes Ranke1-0/+1
2015-07-20Ignore a test.R fileJohannes Ranke1-0/+1
2015-07-20Avoid error message for SFORB in endpoints, updatesJohannes Ranke1-0/+1
2015-06-29Do not include plots and R output in READMEJohannes Ranke1-1/+0
This does not get rendered properly on CRAN, and is easily replaced by links to the static documentation on R-Forge.
2015-06-26More plotting in help files, fix Make- and .*ignore filesJohannes Ranke1-0/+1
2015-06-25Add CRAN release dates to NEWS.mdJohannes Ranke1-1/+0
Remove leftovers from using a plain text NEWS file
2015-06-23Version bump, keep logs of build, check and testJohannes Ranke1-0/+3
2015-06-23Remove Rplots.pdf that is being built by staticdocsJohannes Ranke1-0/+1
2015-06-22Another reorganisation of vignette building by GNUmakefileJohannes Ranke1-0/+2
2015-06-22Version bump, correct benchmark in vignette/compiled_modelsJohannes Ranke1-15/+13
Reorganisation of the vignette generation in the Makefile. Improved YAML header in the R markdown vignettes. Rebuilt vignettes with the package installed.
2015-05-19Include output in README, use mkinsub() in example codeJohannes Ranke1-0/+2
2014-11-13Exclude vignette building timestamp as R CMD check complainsJohannes Ranke1-0/+1
2014-06-30Format the NEWS file in markdown, add Makefile targetJohannes Ranke1-0/+1
2014-05-08Support building static documentation, build itJohannes Ranke1-0/+1
2014-05-05Fix .Rbuildignore, control font size in mkinparplotJohannes Ranke1-1/+1
2014-05-02Next try at showing the screenshot, ignore in buildJohannes Ranke1-0/+1
2013-11-17Conflicts:jranke1-0/+13
README.md TODO git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@163 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
2013-11-11- Add a simple makefilejranke1-0/+1
- Add a .Rbuildignore file - Clean up unit tests a bit - Test the gwidgets notebook from the knitr demo git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@150 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

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