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2023-01-09Prebuilt PDF vignettes, summary_listingJohannes Ranke1-0/+4
2023-01-03Reflect changed name of dll directory in templateJohannes Ranke1-1/+1
2023-01-03Improved skeleton for hierarchical fitsJohannes Ranke1-0/+1
Now with working pathway fits using SFORB-SFO2 (only two parallel metabolites instead of three) as the data for compound Ia was not sufficient for a reliable fit.
2022-12-19Rename template folder, create formatJohannes Ranke1-3/+3
Instead of rmarkdown::pdf_document, mkin::hierarchical_kinetics is used as a document format in the template. In this way, the template file can be freed from some R code and yaml options that the average user does not have to be aware of.
2022-12-19Template and spreadsheet for hierarchical kineticsJohannes Ranke1-0/+3
The template only shows parent data evaluation without covariate models for now. The spreadsheet will also be useful for unit testing of the read_spreadsheet function.
2018-03-11Static docs rebuilt again, with current pkgdownJohannes Ranke1-1/+0
2018-03-09Another rebuild of the static docsJohannes Ranke1-0/+2
Now with rbenchmark installed, to get results for the compiled_models vignette
2016-12-08Static documentation articles rebuilt by pkgdown::build_articles()Johannes Ranke1-1/+1
2016-12-08Do not keep docs/articles/cache in gitJohannes Ranke1-4/+5
2016-12-08Documentation and Makefile improvementsJohannes Ranke1-0/+1
- Fix the remaining links to static docs on r-forge in README - Build mkin_*.tar.gz packages in current directory - check and test (test.log unchanged)
2016-11-17Remove trailing whitespace, clean headersJohannes Ranke1-0/+1
Also ignore test.R in the top level directory, as it is not meant to be public
2016-10-13Cleaning up a bitJohannes Ranke1-1/+0
2015-08-22Generate README.html for my cgit setup on jrwb.deJohannes Ranke1-1/+0
2015-07-20Ignore a test.R fileJohannes Ranke1-0/+1
2015-06-26More plotting in help files, fix Make- and .*ignore filesJohannes Ranke1-1/+0
2015-06-25Add CRAN release dates to NEWS.mdJohannes Ranke1-1/+0
Remove leftovers from using a plain text NEWS file
2015-06-23Version bump, keep logs of build, check and testJohannes Ranke1-0/+1
2015-06-22Version bump, correct benchmark in vignette/compiled_modelsJohannes Ranke1-6/+12
Reorganisation of the vignette generation in the Makefile. Improved YAML header in the R markdown vignettes. Rebuilt vignettes with the package installed.
2015-06-21Do the t-test for untransformed parametersv0.9-36Johannes Ranke1-1/+2
2015-05-19Include output in README, use mkinsub() in example codeJohannes Ranke1-0/+1
2015-05-15Merge branch 'master' into compile_odesJohannes Ranke1-0/+2
Conflicts (resolved manually, deleting code that I had integrated into the RUnit tests for testing the compiled version): .gitignore DESCRIPTION inst/unitTests/runit.mkinerrmin.R inst/unitTests/runit.mkinfit.R tests/testthat/test_mkinpredict_SFO_SFO.R vignettes/FOCUS_L.html
2015-05-14Start of migration from RUnit to testthatJohannes Ranke1-0/+1
2015-04-18Add a vignette showing the performance of compiled modelsJohannes Ranke1-0/+2
2015-02-20Fix printing the summary if iterations are not availableJohannes Ranke1-0/+1
This was broken for using method.modFit = "SANN"
2014-07-21Ignore vignette build timestampJohannes Ranke1-0/+1
2014-07-14Bugfix release version 0.9-31Johannes Ranke1-1/+0
2014-06-30Format the NEWS file in markdown, add Makefile targetJohannes Ranke1-0/+1
2014-05-08Support building static documentation, build itJohannes Ranke1-0/+1
2013-11-17Conflicts:jranke1-0/+9
README.md TODO git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@163 edb9625f-4e0d-4859-8d74-9fd3b1da38cb

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