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2020-03-30First nlme fits for models with a metaboliteJohannes Ranke19-123/+400
2020-03-29First automatic generation of an nlme modelJohannes Ranke2-58/+133
2020-03-27Merge branch 'master' into mxkinJohannes Ranke46-113/+1114
2020-03-18Clarify comment in example codeJohannes Ranke1-1/+1
2020-02-14Delete trailing whitespaceJohannes Ranke1-11/+11
2020-02-14Update local r-forge path in MakefileJohannes Ranke1-1/+1
2020-01-09Remove unused FME package from DESCRIPTION textJohannes Ranke9-20/+18
2020-01-08Todays date in DESCRIPTION, update check logv0.9.49.8Johannes Ranke2-2/+3
2020-01-08Typos in NEWS, update static docsJohannes Ranke2-2/+2
2019-12-16Argument ymax for plot.mmkinJohannes Ranke3-13/+25
2019-12-10More additions to the READMEJohannes Ranke3-5/+9
2019-12-10Update and amend the READMEJohannes Ranke3-7/+58
2019-12-09Consistently use "two-component error model"Johannes Ranke4-7/+7
instead of "two component error model"
2019-11-13Improve formatting using markdownJohannes Ranke3-21/+19
2019-11-13Improve READMEJohannes Ranke3-19/+12
2019-11-13Calculate Akaike weightsJohannes Ranke12-11/+361
2019-11-13Improve citationJohannes Ranke1-1/+2
2019-11-13Likelihood ratio test for mmkin columns with two fitsJohannes Ranke5-7/+15
2019-11-13Remove leftover lineJohannes Ranke1-2/+0
2019-11-12lrtest method for mmkin columns with two fitsJohannes Ranke1-0/+9
2019-11-09Add a lack-of-fit testJohannes Ranke20-27/+605
- Switch an example dataset in the test setup to a dataset with replicates, adapt tests - Skip the test for lrtest with an update specification as it does not only fail when pkgdown generates static help pages, but also in testthat
2019-11-06Attempt of an overall model for an mmkin rowJohannes Ranke1-0/+58
2019-11-05Fix standardized residual plots in 'plot_res'Johannes Ranke6-13/+17
2019-11-04Static documentation rebuilt by pkgdownJohannes Ranke9-16/+32
2019-11-04Scaled residual plotsJohannes Ranke10-45/+88
2019-11-04Include fixed parameters in model names in lrtestJohannes Ranke8-33/+68
2019-11-01Another documentation fixJohannes Ranke3-11/+8
2019-11-01Make the 'quadratic' the default for 'confint'Johannes Ranke25-471/+232
Also the documentation was improved here and there
2019-11-01Update link, increase tolerance of a test for Travisv0.9.49.7Johannes Ranke4-5/+5
2019-11-01Fix bug in yesterdays release, add methods for BICJohannes Ranke94-2282/+362
2019-10-31Increase tolerance of a test for winbuilderv0.9.49.6Johannes Ranke2-2/+2
- Update DESCRIPTION for release
2019-10-31Reorganize tests to reduce time on winbuilderJohannes Ranke9-62/+52
2019-10-31Comment out example code that fails in pkgdownJohannes Ranke3-5/+16
2019-10-31More plots that are not reproducible on TravisJohannes Ranke1-1/+1
2019-10-31Increase numeric tolerance of three tests for TravisJohannes Ranke2-3/+3
2019-10-31Add likelihood ratio test and other methods, fixesJohannes Ranke33-129/+1672
The likelihood ratio test method is lrtest, in addition, methods for update and residuals were added.
2019-10-29Return single parameters correctly from confintJohannes Ranke3-31/+48
Static documentation rebuilt by pkgdown
2019-10-28Parallel computation for confidence intervalsJohannes Ranke4-36/+268
Only on Linux at the moment. Some more examples in the help page. Remove the distribution argument for the quadratic method
2019-10-28Improve formattingJohannes Ranke3-2/+4
2019-10-28Fix the cutoff for likelihood based intervalsJohannes Ranke7-86/+105
The cutoff now matches what is given by Venzon and Moolgavkar (1988). Also, confidence intervals closely match intervals obtained with stats4::confint in the test case where an stats4::mle object is created from the likelihood function in one test case. Static documentation rebuilt by pkgdown
2019-10-26Fix checks and testsJohannes Ranke15-33/+513
Static documentation rebuilt by pkgdown
2019-10-26Address some check and test failuresJohannes Ranke4-6/+7
2019-10-26parms and confint methodsJohannes Ranke9-75/+407
The confint method can do profile likelihood based confidence intervals!
2019-10-25Static documentation rebuilt by pkgdownJohannes Ranke48-1277/+1275
2019-10-25Use roxygen for functions and methodsJohannes Ranke75-3834/+5103
2019-10-22Somehow the figures weren't committed yetJohannes Ranke2-0/+195
2019-10-22Two more plotting testsJohannes Ranke2-4/+8
2019-10-22Update README.htmlJohannes Ranke1-15/+20
2019-10-22Skip the visual test that still fails on travisJohannes Ranke1-1/+2
2019-10-22Go back to d_3 for errmod = "obs"Johannes Ranke6-47/+20
in the hope that this makes plotting cross-platform also for this error model

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