mkin - Fitting kinetic models to chemical degradation data (also on github)

Age	Commit message (Collapse)	Author	Files	Lines
2022-04-12	Fix using defaults for log rate constants	Johannes Ranke	1	-1/+3

2022-04-09	Improvements to mean_degparms() and plot.mixed.mmkin()	Johannes Ranke	1	-2/+6
	- New argument 'default_log_parms' for mean_degparms() - 'plot.mixed.mmkin': Pass the frame argument also to residual plots, take the 'default_log_parms' argument for 'mean_degparms' used for constructing approximate population curves, plot population curve last to avoid that it is covered by data
2021-06-11	Finished 'summary.nlmixr.mmkin', checks, docs	Johannes Ranke	1	-1/+2

2021-06-09	Rudimentary support for setting up nlmixr models	Johannes Ranke	1	-0/+61
	- All degradation models are specified as ODE models. This appears to be fast enough - Error models are being translated to nlmixr as close to the mkin error model as possible. When using the 'saem' backend, it appears not to be possible to use the same error model for more than one observed variable - No support yet for models with parallel formation of metabolites, where the ilr transformation is used in mkin per default - There is a bug in nlmixr which appears to be triggered if the data are not balanced, see nlmixrdevelopment/nlmixr#530 - There is a print and a plot method, the summary method is not finished