index
:
mkin
C_analytical
dev
main
nlmixr
odeintr
stackoverflow_71340826
Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
R
/
mkinfit.R
Age
Commit message (
Expand
)
Author
Files
Lines
2014-01-22
Merge branch 'master' of https://github.com/jranke/mkin
Johannes Ranke
1
-3
/
+5
2014-01-17
- Use mkinmod$spec instead of mkinmod$map wherever possible, in order to make...
Johannes Ranke
1
-4
/
+4
2013-12-04
Make it possible to use different ode solvers
=
1
-3
/
+5
2013-11-13
Squashed commit of the following:
jranke
1
-0
/
+2
2013-11-05
- Use an increasing small numeric value instead of random numbers for generat...
jranke
1
-1
/
+5
2013-11-04
Add small random numbers to default initial values for rate constants to avoid
jranke
1
-2
/
+2
2013-11-04
Bugfix for a recently introduced breakage of fixed_initials
jranke
1
-1
/
+4
2013-10-30
- Backtransform fixed ODE parameters for the summary (compare ChangeLog)
jranke
1
-2
/
+2
2013-10-29
- Just one little formatting change in mkinfit.R
jranke
1
-1
/
+2
2013-10-17
- Fix reweighting for the case of many metabolites
jranke
1
-1
/
+1
2013-10-16
- More consistent output regarding optimised and fixed parameters (see Change...
jranke
1
-4
/
+9
2013-10-10
- IRLS is implemented
jranke
1
-14
/
+58
2013-10-10
- Added a ChangeLog
jranke
1
-16
/
+33
2013-06-18
Pending check-in of stuff started at east one month ago:
jranke
1
-0
/
+3
2013-04-14
- Update the TODO list, setting some requirements for version 1.0
jranke
1
-2
/
+12
2013-03-15
Add the solution type used in the fit to the summary
jranke
1
-0
/
+4
2013-03-12
Improve formatting of data in print.summary.mkinfit()
jranke
1
-1
/
+1
2013-03-05
- Calculate confidence intervals for parameters based on the t distribution
jranke
1
-22
/
+37
2013-02-21
Make the use of globalVariable() conditional on R Version >= 2.15.1,
jranke
1
-1
/
+1
2013-02-18
- Completion of the multicompartment part of the mkin examples vignette
jranke
1
-9
/
+13
2013-02-17
- Added the examples vignette to the kinfit package
jranke
1
-1
/
+2
2013-02-16
- Some maintenance fixes
jranke
1
-1
/
+1
2013-02-05
- Prevent wrong association of colors and linetypes in plots during mkinfit o...
jranke
1
-6
/
+7
2012-11-26
- Added an S3 plot method for mkinfit models
jranke
1
-1
/
+1
2012-07-03
- Add rtol argument in order to increase the precision of deSolve based
jranke
1
-3
/
+4
2012-06-25
- Document endpoints() function
jranke
1
-12
/
+16
2012-06-18
Put the calculation of dissipation times, formation fractions and SFORB eigen...
jranke
1
-93
/
+5
2012-05-07
- Moved the call to mkinerrmin to summary.mkinfit
jranke
1
-33
/
+12
2012-04-25
- Some more unit tests
jranke
1
-8
/
+7
2012-04-24
- Added the reference fit data for FOCUS 2006 datasets from the kinfit package
jranke
1
-5
/
+28
2012-04-23
- Fixed a couple of things
jranke
1
-1
/
+5
2012-04-23
- Some fixes to mkinfit, to account for the changes in mkinmod
jranke
1
-18
/
+25
2012-04-16
- Start of an adaptation of mkinfit, but it seems nothing is really needed
jranke
1
-0
/
+6
2012-04-11
Added subversion keyword substitution to R source files in order to get corre...
jranke
1
-1
/
+1
2012-04-10
- Fitting and summaries now work with the new parameter transformations.
jranke
1
-40
/
+29
2012-04-03
- Separated model prediction out into a separate function
jranke
1
-184
/
+45
2012-03-27
Start of the transition to fitting transformed parameters.
jranke
1
-43
/
+53
2012-03-15
Update kinfit and mkin to the latest version published on BerliOS.
jranke
1
-70
/
+328
2010-05-31
- Added a test based on the KinGUI paper "complex case"
jranke
1
-3
/
+3
2010-05-20
Various improvements, the most prominent being the addition of the
jranke
1
-12
/
+24
2010-05-18
Much more complete version that was just submitted to CRAN.
jranke
1
-18
/
+222
2010-05-11
Initial upload of the upcoming multicompartment version of kinfit.
jranke
1
-0
/
+66
Contact
-
Imprint