| Age | Commit message (Expand) | Author | Files | Lines |
|---|
| 2014-07-21 | Bugfix, model shorthand, state.ini[[1]] from observed data | Johannes Ranke | 1 | -3/+24 |
| 2014-07-17 | Return complete list of initial states after fitting | Johannes Ranke | 1 | -1/+4 |
| 2014-07-17 | Handle non-convergence and maximum number of iterations | Johannes Ranke | 1 | -35/+82 |
| 2014-07-14 | Merge bugfix branch 'master' into iore | Johannes Ranke | 1 | -19/+17 |
| 2014-07-14 | Bugfix release version 0.9-31 | Johannes Ranke | 1 | -19/+17 |
| 2014-07-12 | First working fits with IORE model | Johannes Ranke | 1 | -1/+3 |
| 2014-07-02 | Do not introduce formation fractions for singular pathways | Johannes Ranke | 1 | -23/+16 |
| 2014-07-02 | Warning -> message, and only if initial parameter was not 1 | Johannes Ranke | 1 | -2/+4 |
| 2014-07-02 | Set implicit formation fraction to 1 even if set otherwise in parms.ini | Johannes Ranke | 1 | -6/+8 |
| 2014-07-02 | Move handling of implicitly fixed formation fractions to mkinfit | Johannes Ranke | 1 | -13/+11 |
| 2014-07-02 | Support formation fractions without sink pathway, updates | Johannes Ranke | 1 | -50/+113 |
| 2014-07-01 | One more source code comment | Johannes Ranke | 1 | -0/+2 |
| 2014-06-27 | Reorganize the summary in a more logical order | Johannes Ranke | 1 | -19/+19 |
| 2014-05-20 | Step back regarding confidence intervals of formation fractions | Johannes Ranke | 1 | -3/+15 |
| 2014-05-09 | Set upper and lower boundx for untransformed fractions | Johannes Ranke | 1 | -3/+16 |
| 2014-04-30 | Fix of bug introduced with t-test | Johannes Ranke | 1 | -1/+1 |
| 2014-04-30 | Restore t-test (1- and 2-sided) for fitted parameters | Johannes Ranke | 1 | -3/+6 |
| 2014-04-25 | McCall 2,4,5-T dataset, lower bound for transform_rates=FALSE | Johannes Ranke | 1 | -2/+11 |
| 2014-04-22 | Possibility to fit without parameter transformation | Johannes Ranke | 1 | -8/+26 |
| 2014-02-27 | Format of gmkin workspace files, copyright, updates | Johannes Ranke | 1 | -0/+1 |
| 2014-01-22 | Merge branch 'master' of https://github.com/jranke/mkin | Johannes Ranke | 1 | -3/+5 |
| 2014-01-17 | - Use mkinmod$spec instead of mkinmod$map wherever possible, in order to make... | Johannes Ranke | 1 | -4/+4 |
| 2013-12-04 | Make it possible to use different ode solvers | = | 1 | -3/+5 |
| 2013-11-13 | Squashed commit of the following: | jranke | 1 | -0/+2 |
| 2013-11-05 | - Use an increasing small numeric value instead of random numbers for generat... | jranke | 1 | -1/+5 |
| 2013-11-04 | Add small random numbers to default initial values for rate constants to avoid | jranke | 1 | -2/+2 |
| 2013-11-04 | Bugfix for a recently introduced breakage of fixed_initials | jranke | 1 | -1/+4 |
| 2013-10-30 | - Backtransform fixed ODE parameters for the summary (compare ChangeLog) | jranke | 1 | -2/+2 |
| 2013-10-29 | - Just one little formatting change in mkinfit.R | jranke | 1 | -1/+2 |
| 2013-10-17 | - Fix reweighting for the case of many metabolites | jranke | 1 | -1/+1 |
| 2013-10-16 | - More consistent output regarding optimised and fixed parameters (see Change... | jranke | 1 | -4/+9 |
| 2013-10-10 | - IRLS is implemented | jranke | 1 | -14/+58 |
| 2013-10-10 | - Added a ChangeLog | jranke | 1 | -16/+33 |
| 2013-06-18 | Pending check-in of stuff started at east one month ago: | jranke | 1 | -0/+3 |
| 2013-04-14 | - Update the TODO list, setting some requirements for version 1.0 | jranke | 1 | -2/+12 |
| 2013-03-15 | Add the solution type used in the fit to the summary | jranke | 1 | -0/+4 |
| 2013-03-12 | Improve formatting of data in print.summary.mkinfit() | jranke | 1 | -1/+1 |
| 2013-03-05 | - Calculate confidence intervals for parameters based on the t distribution | jranke | 1 | -22/+37 |
| 2013-02-21 | Make the use of globalVariable() conditional on R Version >= 2.15.1, | jranke | 1 | -1/+1 |
| 2013-02-18 | - Completion of the multicompartment part of the mkin examples vignette | jranke | 1 | -9/+13 |
| 2013-02-17 | - Added the examples vignette to the kinfit package | jranke | 1 | -1/+2 |
| 2013-02-16 | - Some maintenance fixes | jranke | 1 | -1/+1 |
| 2013-02-05 | - Prevent wrong association of colors and linetypes in plots during mkinfit o... | jranke | 1 | -6/+7 |
| 2012-11-26 | - Added an S3 plot method for mkinfit models | jranke | 1 | -1/+1 |
| 2012-07-03 | - Add rtol argument in order to increase the precision of deSolve based | jranke | 1 | -3/+4 |
| 2012-06-25 | - Document endpoints() function | jranke | 1 | -12/+16 |
| 2012-06-18 | Put the calculation of dissipation times, formation fractions and SFORB eigen... | jranke | 1 | -93/+5 |
| 2012-05-07 | - Moved the call to mkinerrmin to summary.mkinfit | jranke | 1 | -33/+12 |
| 2012-04-25 | - Some more unit tests | jranke | 1 | -8/+7 |
| 2012-04-24 | - Added the reference fit data for FOCUS 2006 datasets from the kinfit package | jranke | 1 | -5/+28 |
