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2022-07-21Summary method for mmkin objectsJohannes Ranke1-41/+10
Also, add a method for gathering convergence information and a method for gathering information on ill-defined parameters
2021-04-21Version 1.0.4 published yesterdayv1.0.4Johannes Ranke1-2/+3
2021-02-04Documentation improvements, mainly fixing example codeJohannes Ranke1-0/+1
The errors in the example code were in the \dontrun sections, so they were not caught by CRAN checks. In addition, the static help files generated with pkgdown were cached, so I noticed the errors only after completely regenerating the documentation for version 1.0.0.
2020-11-19Depend on parallel, doc improvementsJohannes Ranke1-0/+11
By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9.
2020-11-12Model names in lrtest.mmkin, fix for print.mmkinJohannes Ranke1-2/+3
Fix the display of warnings and errors in print.mmkin, the matrix was erroneously transposed.
2020-11-06Fast analytical solutions for saemix, update.mmkinJohannes Ranke1-2/+30
Also, use logit transformation for g and for solitary formation fractions, addressing #10.
2020-10-24Printing method for mmkin objectsJohannes Ranke1-5/+48
2020-07-15Improve handling of (partially) failing fitsJohannes Ranke1-2/+3
2020-07-15Use try() within mmkinJohannes Ranke1-1/+1
This keeps mmkin from stopping if one of the fits fails. Instead, a try-error is assigned to the respective position in the mmkin object.
2020-05-26Use all cores per default, confint toleranceJohannes Ranke1-2/+3
Also, use more intelligent starting values for the variance of the random effects for saemix. While this does not appear to speed up the convergence, it shows where this variance is greatly reduced by using mixed-effects models as opposed to the separate independent fits.
2020-04-07Improve documentation of mmkin objectsJohannes Ranke1-2/+3
2020-02-14Delete trailing whitespaceJohannes Ranke1-11/+11
2019-10-25Use roxygen for functions and methodsJohannes Ranke1-22/+91
2019-02-22Further adaptations for the logistic modelJohannes Ranke1-2/+2
- Make mmkin compatible - Return DT50 values corresponding to k0 and kmax - Turn incompatible parameter names in parms.ini from an error to a warning, in order to make it possible to use this argument in calls to mmkin
2016-11-17Remove trailing whitespace, clean headersJohannes Ranke1-5/+5
Also ignore test.R in the top level directory, as it is not meant to be public
2015-06-26Subsetting and plotting for mmkin objectsJohannes Ranke1-0/+28
Including documentation and documentation improvements for mmkin().
2015-06-25Fix fitting with parLapply, doc fixJohannes Ranke1-1/+1
2015-06-25Add mmkin for testingJohannes Ranke1-0/+46

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