mkin - Fitting kinetic models to chemical degradation data (also on github)

Age	Commit message (Collapse)	Author	Files	Lines
2021-04-21	Version 1.0.4 published yesterdayv1.0.4	Johannes Ranke	1	-2/+3

2021-02-04	Documentation improvements, mainly fixing example code	Johannes Ranke	1	-0/+1
	The errors in the example code were in the \dontrun sections, so they were not caught by CRAN checks. In addition, the static help files generated with pkgdown were cached, so I noticed the errors only after completely regenerating the documentation for version 1.0.0.
2020-11-19	Depend on parallel, doc improvements	Johannes Ranke	1	-0/+11
	By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9.
2020-11-12	Model names in lrtest.mmkin, fix for print.mmkin	Johannes Ranke	1	-2/+3
	Fix the display of warnings and errors in print.mmkin, the matrix was erroneously transposed.
2020-11-06	Fast analytical solutions for saemix, update.mmkin	Johannes Ranke	1	-2/+30
	Also, use logit transformation for g and for solitary formation fractions, addressing #10.
2020-10-24	Printing method for mmkin objects	Johannes Ranke	1	-5/+48

2020-07-15	Improve handling of (partially) failing fits	Johannes Ranke	1	-2/+3

2020-07-15	Use try() within mmkin	Johannes Ranke	1	-1/+1
	This keeps mmkin from stopping if one of the fits fails. Instead, a try-error is assigned to the respective position in the mmkin object.
2020-05-26	Use all cores per default, confint tolerance	Johannes Ranke	1	-2/+3
	Also, use more intelligent starting values for the variance of the random effects for saemix. While this does not appear to speed up the convergence, it shows where this variance is greatly reduced by using mixed-effects models as opposed to the separate independent fits.
2020-04-07	Improve documentation of mmkin objects	Johannes Ranke	1	-2/+3

2020-02-14	Delete trailing whitespace	Johannes Ranke	1	-11/+11

2019-10-25	Use roxygen for functions and methods	Johannes Ranke	1	-22/+91

2019-02-22	Further adaptations for the logistic model	Johannes Ranke	1	-2/+2
	- Make mmkin compatible - Return DT50 values corresponding to k0 and kmax - Turn incompatible parameter names in parms.ini from an error to a warning, in order to make it possible to use this argument in calls to mmkin
2016-11-17	Remove trailing whitespace, clean headers	Johannes Ranke	1	-5/+5
	Also ignore test.R in the top level directory, as it is not meant to be public
2015-06-26	Subsetting and plotting for mmkin objects	Johannes Ranke	1	-0/+28
	Including documentation and documentation improvements for mmkin().
2015-06-25	Fix fitting with parLapply, doc fix	Johannes Ranke	1	-1/+1

2015-06-25	Add mmkin for testing	Johannes Ranke	1	-0/+46