| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2022-10-29 | Update multistart docs | Johannes Ranke | 1 | -2/+2 | |
| 2022-10-28 | Rename parhist to parplot and make it generic | Johannes Ranke | 1 | -3/+3 | |
| That parhist name was not the brightest idea, as it does not show histograms. | |||||
| 2022-10-28 | Rename 'convergence' method to 'status' | Johannes Ranke | 1 | -6/+6 | |
| The reason is that it is misleading in the case of saem.mmkin objects, because convergence is not really checked there. | |||||
| 2022-10-26 | Update multistart example code and vignette | Johannes Ranke | 1 | -9/+3 | |
| 2022-10-26 | Make multistart work with testthat scopes | Johannes Ranke | 1 | -3/+20 | |
| Also skip long-running test with saem using the analytical from mkin | |||||
| 2022-10-21 | Make update.saem.mmkin work with objects from multistart | Johannes Ranke | 1 | -6/+10 | |
| In particular, objects selected using best.multistart can now be updated, as the starting parameters are inserted into the call, without reference to 'start_parms' which will not be available outside the multistart method. | |||||
| 2022-10-17 | SFORB in saem, update for mhmkin and multistart | Johannes Ranke | 1 | -0/+29 | |
| 2022-10-14 | Select best fit from multistart, use in parhist | Johannes Ranke | 1 | -1/+39 | |
| - Add 'best' and 'which.best' generics with methods for multistart objects - Per default, scale the parameters in parhist plots using the fit with the highest log likelihood. | |||||
| 2022-09-28 | Fix handling of multistart fits with failures | Johannes Ranke | 1 | -6/+42 | |
| 2022-09-19 | Make the multistart method work on Windows | Johannes Ranke | 1 | -10/+24 | |
| 2022-09-19 | Improve parhist and llhist | Johannes Ranke | 1 | -2/+2 | |
| In particular, adapt the display of parameter boxplots for saem fits using mkin transformations to the way used for saem fits using saemix transformations, i.e. always show parameters on the natural scale, and normalised them by dividing by the median from the multiple runs. | |||||
| 2022-09-16 | Improve multistart documentation, bugfix | Johannes Ranke | 1 | -55/+36 | |
| - Split out llhist and parhist documentation - Add example code for multistart - Create a multistart vignette, because the example code fails when run by pkgdown - Fix multistart for the case of mkin transformations in the saem fit | |||||
| 2022-09-16 | Improve docs and update pkgdown | Johannes Ranke | 1 | -4/+4 | |
| 2022-09-16 | Diagnostic plots for multistart method | Johannes Ranke | 1 | -4/+55 | |
| 2022-09-13 | More work on multistart | Johannes Ranke | 1 | -0/+1 | |
| 2022-08-31 | Some more work on multistart | Johannes Ranke | 1 | -1/+16 | |
| 2022-08-14 | Basic multistart method for saem.mmkin objects | Johannes Ranke | 1 | -3/+23 | |
| 2022-08-11 | Start a multistart method | Johannes Ranke | 1 | -0/+24 | |
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index : mkin | |
| Fitting kinetic models to chemical degradation data (also on github) | Johannes Ranke |
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