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2022-10-29Update multistart docsJohannes Ranke1-2/+2
2022-10-28Rename parhist to parplot and make it genericJohannes Ranke1-3/+3
That parhist name was not the brightest idea, as it does not show histograms.
2022-10-28Rename 'convergence' method to 'status'Johannes Ranke1-6/+6
The reason is that it is misleading in the case of saem.mmkin objects, because convergence is not really checked there.
2022-10-26Update multistart example code and vignetteJohannes Ranke1-9/+3
2022-10-26Make multistart work with testthat scopesJohannes Ranke1-3/+20
Also skip long-running test with saem using the analytical from mkin
2022-10-21Make update.saem.mmkin work with objects from multistartJohannes Ranke1-6/+10
In particular, objects selected using best.multistart can now be updated, as the starting parameters are inserted into the call, without reference to 'start_parms' which will not be available outside the multistart method.
2022-10-17SFORB in saem, update for mhmkin and multistartJohannes Ranke1-0/+29
2022-10-14Select best fit from multistart, use in parhistJohannes Ranke1-1/+39
- Add 'best' and 'which.best' generics with methods for multistart objects - Per default, scale the parameters in parhist plots using the fit with the highest log likelihood.
2022-09-28Fix handling of multistart fits with failuresJohannes Ranke1-6/+42
2022-09-19Make the multistart method work on WindowsJohannes Ranke1-10/+24
2022-09-19Improve parhist and llhistJohannes Ranke1-2/+2
In particular, adapt the display of parameter boxplots for saem fits using mkin transformations to the way used for saem fits using saemix transformations, i.e. always show parameters on the natural scale, and normalised them by dividing by the median from the multiple runs.
2022-09-16Improve multistart documentation, bugfixJohannes Ranke1-55/+36
- Split out llhist and parhist documentation - Add example code for multistart - Create a multistart vignette, because the example code fails when run by pkgdown - Fix multistart for the case of mkin transformations in the saem fit
2022-09-16Improve docs and update pkgdownJohannes Ranke1-4/+4
2022-09-16Diagnostic plots for multistart methodJohannes Ranke1-4/+55
2022-09-13More work on multistartJohannes Ranke1-0/+1
2022-08-31Some more work on multistartJohannes Ranke1-1/+16
2022-08-14Basic multistart method for saem.mmkin objectsJohannes Ranke1-3/+23
2022-08-11Start a multistart methodJohannes Ranke1-0/+24

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