mkin - Fitting kinetic models to chemical degradation data (also on github)

Age	Commit message (Collapse)	Author	Files	Lines
2020-11-30	Log-Cholesky parameterisation as default in nlme.mmkin	Johannes Ranke	1	-1/+0

2020-11-05	Fix mean_degparms() if only one optimised parameter	Johannes Ranke	1	-5/+7

2020-10-26	Put the legend in its own area for plot.nlme.mmkin	Johannes Ranke	1	-1/+5

2020-05-26	Use all cores per default, confint tolerance	Johannes Ranke	1	-1/+1
	Also, use more intelligent starting values for the variance of the random effects for saemix. While this does not appear to speed up the convergence, it shows where this variance is greatly reduced by using mixed-effects models as opposed to the separate independent fits.
2020-05-14	Test markdown link, article update due to .rmd extension	Johannes Ranke	1	-1/+1

2020-05-07	Another overhaul of analytical solutions	Johannes Ranke	1	-3/+3
	Still in preparation for analytical solutions of coupled models
2020-04-16	mean_degparms: Fix rownames in random effects	Johannes Ranke	1	-1/+1

2020-04-15	Include random effects in starting parameters	Johannes Ranke	1	-70/+18
	- mean_degparms() now optionally returns starting values for fixed and random effects, which makes it possible to obtain acceptable fits also in more difficult cases (with more parameters) - Fix the anova method, as it is currently not enough to inherit from lme: https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17761 - Show fit information, and per default also errmin information in plot.nlme.mmkin() - Examples for nlme.mmkin: Decrease tolerance and increase the number of iterations in the PNLS step in order to be able to fit FOMC-SFO and DFOP-SFO
2020-04-14	Add a nlme method for mmkin row objects	Johannes Ranke	1	-10/+7

2020-04-14	Keep order of datasets in nlme_data, add a plot	Johannes Ranke	1	-2/+9

2020-04-10	Improve nlme function docs	Johannes Ranke	1	-34/+33

2020-04-04	Add three functions to facilitate the use of nlme	Johannes Ranke	1	-0/+213