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stackoverflow_71340826
Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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saem.R
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2022-11-16
We get about 25% performance gain
Johannes Ranke
1
-6
/
+16
2022-11-15
Import saemix for easier profiling, update online docs
Johannes Ranke
1
-1
/
+2
2022-11-14
Automatic starting parameters for saem.mmkin
Johannes Ranke
1
-1
/
+28
2022-11-08
Same SFORB simplification for saem.mmkin fits
Johannes Ranke
1
-2
/
+2
2022-11-07
Make print and summary for saem.mmkin more robust
Johannes Ranke
1
-5
/
+10
2022-11-04
Never fail with errors in saem.mmkin
Johannes Ranke
1
-6
/
+0
2022-10-31
Possibility to override the error model in update.saem
Johannes Ranke
1
-9
/
+10
2022-10-28
Rename parhist to parplot and make it generic
Johannes Ranke
1
-1
/
+1
2022-10-26
Really test anova output, test covariates
Johannes Ranke
1
-0
/
+5
2022-10-25
Complete documentation and fix a bug
Johannes Ranke
1
-0
/
+1
2022-10-25
Revert accidental change
Johannes Ranke
1
-21
/
+27
2022-10-21
Add a simple anova method for model comparison
Johannes Ranke
1
-4
/
+13
2022-10-20
First working version setting up covariate models
Johannes Ranke
1
-4
/
+53
2022-10-17
SFORB in saem, update for mhmkin and multistart
Johannes Ranke
1
-1
/
+36
2022-10-14
update method for mhmkin objects, clarify comment
Johannes Ranke
1
-2
/
+2
2022-10-13
Cope with failed FIM inversions
Johannes Ranke
1
-1
/
+2
2022-10-05
Simplify the removal of random effects
Johannes Ranke
1
-4
/
+33
2022-09-28
Fix handling of multistart fits with failures
Johannes Ranke
1
-48
/
+77
2022-09-16
Diagnostic plots for multistart method
Johannes Ranke
1
-4
/
+4
2022-09-14
Remove purrr dependency
Johannes Ranke
1
-0
/
+1
2022-08-31
Some more work on multistart
Johannes Ranke
1
-4
/
+17
2022-08-10
Batch processing for hierarchical fits
Johannes Ranke
1
-0
/
+34
2022-08-09
Update docs for saem
Johannes Ranke
1
-3
/
+3
2022-08-08
Error on unsupported saemix transformations
Johannes Ranke
1
-2
/
+13
2022-08-08
Fix fitting HS with saemix transformations
Johannes Ranke
1
-8
/
+19
2022-03-19
Test saemix without special analytical solutions
Johannes Ranke
1
-12
/
+20
2022-03-07
Remove nlmixr interface for release of mkin 1.1.0
Johannes Ranke
1
-1
/
+2
2022-03-01
Make it possible to fix parameters in saem.mmkin
Johannes Ranke
1
-2
/
+3
2022-02-09
Adapt saemix interface to saemix 3.0 on CRAN
Johannes Ranke
1
-1
/
+8
2021-11-17
Update required saemix version, update tests
Johannes Ranke
1
-3
/
+2
2021-06-23
Test log parameters by default when deriving saemix starting parameters
Johannes Ranke
1
-1
/
+1
2021-06-09
Rudimentary support for setting up nlmixr models
Johannes Ranke
1
-0
/
+6
2021-03-20
Fix mkin calculation of saemix residuals
Johannes Ranke
1
-1
/
+1
2021-03-16
Convenience option to set nbiter.saemix
Johannes Ranke
1
-1
/
+5
2021-03-09
Some improvements for borderline cases
Johannes Ranke
1
-5
/
+26
2021-02-06
Reintroduce interface to saemix
Johannes Ranke
1
-0
/
+512
2021-02-03
Prepare for v1.0.0
v1.0.0
Johannes Ranke
1
-512
/
+0
2021-01-22
We do not need to suppress saemix plots any more
Johannes Ranke
1
-12
/
+1
2020-12-19
Possibility to override automatic starting parameters for saem
Johannes Ranke
1
-4
/
+10
2020-12-15
Remove leftovers
Johannes Ranke
1
-3
/
+2
2020-12-09
Make saem using mkinpredict work again
Johannes Ranke
1
-46
/
+51
2020-12-09
Add more tests and fix HS in saem
Johannes Ranke
1
-2
/
+2
2020-12-08
mixed.mmkin and test coverage
Johannes Ranke
1
-1
/
+3
2020-12-07
Possibility to use saemix transformations in some cases
Johannes Ranke
1
-45
/
+127
2020-11-13
More work on f_time_norm_focus
Johannes Ranke
1
-0
/
+2
2020-11-13
Annotation of the fix
Johannes Ranke
1
-1
/
+1
2020-11-13
Fixed plotting of non-analytical solutions in saem
Johannes Ranke
1
-11
/
+20
2020-11-12
mkindsg class to hold groups of datasets
Johannes Ranke
1
-1
/
+1
2020-11-11
Fix docs and passing of dot arguments for saem
Johannes Ranke
1
-6
/
+2
2020-11-11
Rename saemix file, option to suppress saemix messages
Johannes Ranke
1
-0
/
+422
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