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Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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2022-11-15
Import saemix for easier profiling, update online docs
Johannes Ranke
1
-1
/
+2
2022-11-14
Automatic starting parameters for saem.mmkin
Johannes Ranke
1
-1
/
+28
2022-11-08
Same SFORB simplification for saem.mmkin fits
Johannes Ranke
1
-2
/
+2
2022-11-08
Show DFOP g equivalent of SFORB in summary, test
Johannes Ranke
2
-8
/
+11
2022-11-08
Simplify SFORB also in the endpoint function
Johannes Ranke
1
-11
/
+10
2022-11-08
Simplify SFORB analytical solution, whitespace
Johannes Ranke
1
-64
/
+64
2022-11-07
Make print and summary for saem.mmkin more robust
Johannes Ranke
2
-8
/
+18
2022-11-04
Further improvement of robustness of anova method
Johannes Ranke
1
-9
/
+9
2022-11-04
Fix anova.saem.mmkin for unavailable likelihoods
Johannes Ranke
1
-4
/
+10
2022-11-04
Attempt at automatic setting of random effects
Johannes Ranke
1
-4
/
+24
2022-11-04
Make it easy to override maxsteps for lsoda
Johannes Ranke
1
-23
/
+26
2022-11-04
Make illparms.mhmkin and anova.saem.mmkin more robust
Johannes Ranke
3
-12
/
+14
2022-11-04
Never fail with errors in saem.mmkin
Johannes Ranke
1
-6
/
+0
2022-11-01
Add tex_listing()
Johannes Ranke
1
-0
/
+32
2022-11-01
Add read_spreadsheet
Johannes Ranke
1
-0
/
+113
2022-11-01
Fix plotting saem fits with covariates
Johannes Ranke
2
-47
/
+72
2022-11-01
Fix a bug, couldn't set class attribute on NULL
Johannes Ranke
1
-1
/
+1
2022-11-01
Fix illparms tests
Johannes Ranke
1
-1
/
+1
2022-11-01
Improved printing for illparms()
Johannes Ranke
1
-4
/
+20
2022-10-31
Fix R CMD check
Johannes Ranke
1
-3
/
+5
2022-10-31
Possibility to override the error model in update.saem
Johannes Ranke
2
-11
/
+14
2022-10-31
Add anova.mhmkin method
Johannes Ranke
1
-0
/
+16
2022-10-30
Correct documentation of sorting in anova.saem.mmkin()
Johannes Ranke
1
-3
/
+4
2022-10-30
saem summary in case of non-invertible FIM parts
Johannes Ranke
1
-7
/
+13
2022-10-29
Update multistart docs
Johannes Ranke
1
-2
/
+2
2022-10-28
Rename parhist to parplot and make it generic
Johannes Ranke
4
-8
/
+15
2022-10-28
Export status method for mhmkin, move to status.R
Johannes Ranke
2
-39
/
+43
2022-10-28
Rename 'convergence' method to 'status'
Johannes Ranke
5
-27
/
+25
2022-10-26
Really test anova output, test covariates
Johannes Ranke
1
-0
/
+5
2022-10-26
Update multistart example code and vignette
Johannes Ranke
1
-9
/
+3
2022-10-26
Remove kernel density estimate from llhist
Johannes Ranke
1
-11
/
+9
2022-10-26
Make multistart work with testthat scopes
Johannes Ranke
1
-3
/
+20
2022-10-25
Complete documentation and fix a bug
Johannes Ranke
3
-2
/
+6
2022-10-25
Revert accidental change
Johannes Ranke
1
-21
/
+27
2022-10-21
Explain chisq tests in anova
Johannes Ranke
1
-1
/
+2
2022-10-21
Adapt summary.saem.mmkin to covariate models
Johannes Ranke
1
-7
/
+6
2022-10-21
Add a simple anova method for model comparison
Johannes Ranke
2
-4
/
+116
2022-10-21
Make update.saem.mmkin work with objects from multistart
Johannes Ranke
1
-6
/
+10
2022-10-20
First working version setting up covariate models
Johannes Ranke
1
-4
/
+53
2022-10-18
Don't fail if one of the Hessians can't be computed
Johannes Ranke
1
-1
/
+8
2022-10-17
Fix selecting by log likelihood in parhist
Johannes Ranke
1
-8
/
+21
2022-10-17
SFORB in saem, update for mhmkin and multistart
Johannes Ranke
3
-1
/
+69
2022-10-14
update method for mhmkin objects, clarify comment
Johannes Ranke
2
-2
/
+25
2022-10-14
Select best fit from multistart, use in parhist
Johannes Ranke
2
-14
/
+68
2022-10-13
Cope with failed FIM inversions
Johannes Ranke
3
-10
/
+29
2022-10-05
Simplify the removal of random effects
Johannes Ranke
1
-4
/
+33
2022-09-29
Add set_nd_nq previously in pfm
Johannes Ranke
1
-0
/
+164
2022-09-29
More adaptations to deal with failed saem fits
Johannes Ranke
1
-2
/
+8
2022-09-29
Adapt to new format of failed saem.mmkin fits
Johannes Ranke
2
-8
/
+13
2022-09-28
Fix handling of multistart fits with failures
Johannes Ranke
6
-60
/
+147
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