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Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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2014-05-02
Improve display of confidence intervals
Johannes Ranke
1
-4
/
+8
2014-05-02
Add missing files for plotting confindence intervals
Johannes Ranke
1
-0
/
+53
2014-04-30
Fix of bug introduced with t-test
Johannes Ranke
1
-1
/
+1
2014-04-30
Restore t-test (1- and 2-sided) for fitted parameters
Johannes Ranke
1
-3
/
+6
2014-04-29
Restore graphics parameters after plotting with residuals
Johannes Ranke
1
-0
/
+2
2014-04-29
Fix y label in optional residual plot of plot.mkinfit
Johannes Ranke
1
-1
/
+1
2014-04-28
Fix a bug recently introduced to the Hockey stick model
Johannes Ranke
1
-3
/
+3
2014-04-28
Option to add residual plot to plot.mkinfit
Johannes Ranke
2
-16
/
+41
2014-04-26
Fix the default case for obs_vars in plot.mkinfit()
Johannes Ranke
1
-11
/
+5
2014-04-26
Enable selection of observed variables to plot
Johannes Ranke
1
-11
/
+14
2014-04-25
McCall 2,4,5-T dataset, lower bound for transform_rates=FALSE
Johannes Ranke
2
-4
/
+13
2014-04-22
Possibility to fit without parameter transformation
Johannes Ranke
2
-24
/
+51
2014-02-27
Format of gmkin workspace files, copyright, updates
Johannes Ranke
2
-1
/
+3
2014-01-22
Merge branch 'master' of https://github.com/jranke/mkin
Johannes Ranke
3
-20
/
+13
2014-01-17
- Use mkinmod$spec instead of mkinmod$map wherever possible, in order to make...
Johannes Ranke
1
-4
/
+4
2013-12-04
Make it possible to use different ode solvers
=
2
-7
/
+11
2013-12-04
Remove mkinmod warning based on a misconception
Johannes Ranke
1
-13
/
+2
2013-11-18
Add GUI start function, keep GUI here in mkin
Johannes Ranke
1
-0
/
+11
2013-11-13
Squashed commit of the following:
jranke
1
-0
/
+2
2013-11-05
- Use an increasing small numeric value instead of random numbers for generat...
jranke
1
-1
/
+5
2013-11-04
Add small random numbers to default initial values for rate constants to avoid
jranke
1
-2
/
+2
2013-11-04
Complete the fix for fixing initial values for state variables
jranke
2
-1
/
+9
2013-11-04
Bugfix for a recently introduced breakage of fixed_initials
jranke
1
-1
/
+4
2013-10-30
- Backtransform fixed ODE parameters for the summary (compare ChangeLog)
jranke
1
-2
/
+2
2013-10-29
- Just one little formatting change in mkinfit.R
jranke
1
-1
/
+2
2013-10-21
- Simplified implementation of mkinerrmin (see ChangeLog)
jranke
1
-6
/
+9
2013-10-17
- Fix reweighting for the case of many metabolites
jranke
1
-1
/
+1
2013-10-17
- See ChangeLog entry for today (2 small bugfixes and lots of GUI progress)
jranke
1
-1
/
+1
2013-10-16
- More consistent output regarding optimised and fixed parameters (see Change...
jranke
1
-4
/
+9
2013-10-10
- IRLS is implemented
jranke
2
-16
/
+60
2013-10-10
- Added a ChangeLog
jranke
2
-16
/
+34
2013-10-08
- Added the possibility to specify the observed variable in mkinmod in a chec...
jranke
1
-3
/
+4
2013-06-18
Pending check-in of stuff started at east one month ago:
jranke
2
-2
/
+5
2013-04-14
- Update the TODO list, setting some requirements for version 1.0
jranke
3
-2
/
+27
2013-03-15
Add the solution type used in the fit to the summary
jranke
1
-0
/
+4
2013-03-12
Improve formatting of data in print.summary.mkinfit()
jranke
1
-1
/
+1
2013-03-05
- Calculate confidence intervals for parameters based on the t distribution
jranke
1
-22
/
+37
2013-03-04
Introduce the possibility to place the legend with mkin using arguments lpos ...
jranke
1
-2
/
+3
2013-02-21
Make the use of globalVariable() conditional on R Version >= 2.15.1,
jranke
5
-5
/
+8
2013-02-18
- Completion of the multicompartment part of the mkin examples vignette
jranke
4
-14
/
+17
2013-02-18
- Some more work on the vignette
jranke
1
-2
/
+1
2013-02-18
More work on the examples vignette
jranke
1
-8
/
+16
2013-02-18
- Fix the line types in plot.mkinfit again.
jranke
1
-1
/
+2
2013-02-17
- Added the examples vignette to the kinfit package
jranke
6
-5
/
+50
2013-02-16
- Some maintenance fixes
jranke
3
-4
/
+4
2013-02-05
- Prevent wrong association of colors and linetypes in plots during mkinfit o...
jranke
1
-6
/
+7
2012-12-13
Small formatting improvements
jranke
1
-5
/
+8
2012-11-26
- Added an S3 plot method for mkinfit models
jranke
3
-37
/
+48
2012-07-03
- Add rtol argument in order to increase the precision of deSolve based
jranke
3
-5
/
+7
2012-06-28
- Formatting improvement of mkinmod
jranke
2
-18
/
+19
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