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2020-10-24Plot method for nlme.mmkin objectsJohannes Ranke1-0/+2
Update docs
2020-10-15Get current nlme version from CRAN on TravisJohannes Ranke1-2/+2
Also commit the dontrun instruction for saemix I had wanted to commit and switch back to devel mode for pkgdown
2020-10-15Update online docs for release versionJohannes Ranke1-2/+2
2020-10-08Fix issues for releaseJohannes Ranke1-2/+0
2020-05-27Change dev version label to info colorJohannes Ranke1-0/+1
instead of the orange danger color.
2020-05-27Create up to date pkgdown docs in development modeJohannes Ranke1-0/+3
2020-05-25First working version of saemix helper functionsJohannes Ranke1-0/+2
saemix_data depends on a development version of saemix, see pull request saemixdevelopment/saemixextension#2
2020-05-12Add a link to the benchmark vignette to the docsJohannes Ranke1-0/+2
2020-05-11Avoid merge() and data.frame() in cost functionJohannes Ranke1-0/+1
also for deSolve and eigenvalue based solutions. This noticeably increases performance for these methods, see test.log and benchmark vignette.
2020-04-18Avoid assignment to .GlobalEnv for CRANJohannes Ranke1-0/+1
2020-04-15A plot method for nlme.mmkin fitsJohannes Ranke1-0/+5
2020-04-04Static documentation rebuilt by pkgdownJohannes Ranke1-0/+1
2019-11-13Calculate Akaike weightsJohannes Ranke1-0/+1
2019-11-09Add a lack-of-fit testJohannes Ranke1-0/+1
- Switch an example dataset in the test setup to a dataset with replicates, adapt tests - Skip the test for lrtest with an update specification as it does not only fail when pkgdown generates static help pages, but also in testthat
2019-11-01Fix bug in yesterdays release, add methods for BICJohannes Ranke1-0/+1
2019-10-31Add likelihood ratio test and other methods, fixesJohannes Ranke1-8/+11
The likelihood ratio test method is lrtest, in addition, methods for update and residuals were added.
2019-10-26Fix checks and testsJohannes Ranke1-5/+7
Static documentation rebuilt by pkgdown
2019-10-21Improve tests, remove geometric_meanJohannes Ranke1-1/+0
2019-09-18Add url: tag to _pkgdown.ymlJohannes Ranke1-0/+2
Static documentation rebuilt by pkgdown
2019-06-19change to `superseded`Will Beasley1-1/+1
https://en.wiktionary.org/wiki/superseed
2019-06-04Additional algorithm "d_c", more tests, docsJohannes Ranke1-0/+2
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets.
2019-02-26Static documentation rebuilt by pkgdownJohannes Ranke1-0/+1
2019-02-26NAFTA SOP Attachment vignetteJohannes Ranke1-0/+2
Also: - Change rounding in print.nafta - Add dots argument to nafta() - Use cores=1 in examples - Restrict N in IORE model to values > 0
2019-02-26Static documentation rebuilt by pkgdownJohannes Ranke1-0/+6
2019-02-25Add plotting tests, add nafta to pkgdownJohannes Ranke1-0/+1
2019-02-21Add the logistic modelJohannes Ranke1-0/+1
2019-01-31Static documentation rebuilt by pkgdownJohannes Ranke1-0/+1
2018-11-26Include AIC.mmkin to static docsJohannes Ranke1-0/+1
Static documentation rebuilt by pkgdown
2018-11-23Static documentation rebuilt by pkgdownJohannes Ranke1-0/+1
2018-09-14Remove two vignettes from the package but not from docsJohannes Ranke1-2/+2
- Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate
2018-07-18Correct references to the Rocke and Lorenzato modelJohannes Ranke1-1/+1
Rename 'sigma_rl' to 'sigma_twocomp' as the Rocke and Lorenzato model assumes lognormal distribution for large y. Rebuild static documentation.
2018-01-30Reweighting with two-component error modelJohannes Ranke1-0/+1
Static documentation except articles rebuilt by pkgdown
2018-01-05Update _pkgdown.ymlJohannes Ranke1-0/+1
Static documentation except articles rebuilt by pkgdown
2017-09-14Convert FOCUS Z vignette to rmarkdown/htmlJohannes Ranke1-0/+2
- Static documentation rebuilt by pkgdown::build_articles() - DESCRIPTION: Version bump and current date
2017-07-21Rename twa to max_twa_parent, update docsJohannes Ranke1-3/+4
2017-05-05Static documentation except articles rebuilt by pkgdownJohannes Ranke1-0/+1
2017-05-05Static docs except articles rebuilt with current pkgdownJohannes Ranke1-1/+0
2017-03-28Change vignette format for twa vignette, update docsJohannes Ranke1-0/+2
2016-12-08Static documentation except articles rebuilt by pkgdownJohannes Ranke1-0/+2
2016-11-18Fix links in README, configure navbar, rebuild docsJohannes Ranke1-1/+1
2016-11-18Static documentation rebuilt by pkgdown::build_site(run_dont_run = TRUE)Johannes Ranke1-2/+19
Again with the jranke branch of jranke/pkgdown
2016-11-18Do not use ends_with to keep orderingJohannes Ranke1-1/+0
2016-11-18Static documentation rebuilt by pkgdown::build_site(run_dont_run = TRUE)Johannes Ranke1-2/+2
Using branch 'jranke' on jranke/pkgdown, fixing issues hadley/pgkdown#178 and hadley/pkgdown#213 Remove plot=TRUE from mkinfit calls also in dontrun sections of examples to avoid a flood png files documenting the progress of the fit.
2016-11-03Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-1/+6
Using pkgdown with PR hadley/pkgdown#212
2016-10-26Complete pkgdown conf, rerun with current master branchJohannes Ranke1-14/+42
2016-10-06Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-0/+32

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