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2022-10-26Don't test parhist and llhist on travis, docsJohannes Ranke1-1/+1
2022-10-05Simplify the removal of random effectsJohannes Ranke1-1/+1
This is achieved by introducing the argument 'no_random_effect' to the saem function.
2022-09-28Update vignette and static docsJohannes Ranke1-1/+1
2022-09-19Improve parhist and llhistJohannes Ranke1-1/+1
In particular, adapt the display of parameter boxplots for saem fits using mkin transformations to the way used for saem fits using saemix transformations, i.e. always show parameters on the natural scale, and normalised them by dividing by the median from the multiple runs.
2022-09-16Add llhist to the multistart vignetteJohannes Ranke1-1/+1
2022-09-16Improve multistart documentation, bugfixJohannes Ranke1-1/+2
- Split out llhist and parhist documentation - Add example code for multistart - Create a multistart vignette, because the example code fails when run by pkgdown - Fix multistart for the case of mkin transformations in the saem fit
2022-09-16Improve docs and update pkgdownJohannes Ranke1-1/+1
2022-08-10Update dev docsJohannes Ranke1-1/+1
2022-08-10Change dev branch used for docs, update static docsJohannes Ranke1-2/+2
2022-02-28Update docsJohannes Ranke1-7/+7
2022-01-11Update static docsnlmixrJohannes Ranke1-1/+1
2021-10-05Update docsJohannes Ranke1-1/+1
2021-09-29Reduce noise in nlmixr.mmkin output in examplesJohannes Ranke1-1/+1
2021-09-27intervals() methods, more DFOP/tc variantsJohannes Ranke1-1/+1
2021-09-17Put the AIC comparison in a subsubsectionJohannes Ranke1-1/+1
2021-09-16Adapt and improve the dimethenamid vignetteJohannes Ranke1-1/+1
Adapt to the corrected data and unify control parameters for saemix and nlmixr with saem. Update docs
2021-08-04Improve AIC table in vignetteJohannes Ranke1-1/+1
2021-07-29Add citations to the DESCRIPTIONJohannes Ranke1-1/+1
2021-07-29Go back to 1.0.x version, update docsJohannes Ranke1-1/+1
2021-07-27Fix dimethenamid vignette problems and update docsJohannes Ranke1-1/+2
2021-06-22Update development version of online docsJohannes Ranke1-1/+1
2021-06-11Finished 'summary.nlmixr.mmkin', checks, docsJohannes Ranke1-1/+1
2021-03-09Some improvements for borderline casesJohannes Ranke1-1/+1
- fit_with_errors for saem() - test_log_parms for mean_degparms() and saem()
2021-02-15Fully rebuild docs, rerun tests and checkJohannes Ranke1-1/+1
2021-02-13Update static docsJohannes Ranke1-1/+1
2021-02-13Rebuild docsJohannes Ranke1-1/+1
2021-02-13Update docsJohannes Ranke1-1/+1
2021-02-06Reintroduce interface to saemixJohannes Ranke1-2/+2
Also after the upgrade from buster to bullseye of my local system, some test results for saemix have changed.
2021-01-25Change default ylab in plot.mkinfit, explicit ylab for plot.mmkinJohannes Ranke1-1/+1
See NEWS.md. Closes #12
2021-01-11Rebuild docsJohannes Ranke1-1/+1
2020-12-21plot.mixed: Possibility to overlay predictionsJohannes Ranke1-1/+1
2020-12-19Update docsJohannes Ranke1-1/+1
2020-12-16And add the second candidate modelJohannes Ranke1-1/+1
2020-12-16and update docsJohannes Ranke1-1/+1
2020-12-16Add printout of d24 model and update docsJohannes Ranke1-1/+1
2020-12-11Update static docsJohannes Ranke1-1/+1
2020-11-30Complete rebuild of static docs of dev versionJohannes Ranke1-1/+1
2020-11-27Update static docsJohannes Ranke1-1/+1
2020-11-19Depend on parallel, doc improvementsJohannes Ranke1-1/+1
By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9.
2020-11-11Update static docsJohannes Ranke1-1/+1
2020-11-11Add print and plot calls to the saem example codeJohannes Ranke1-1/+1
2020-11-10Digits for summary methods, print.saem.mmkinJohannes Ranke1-1/+1
2020-11-09saemix.mmkin and nlme.mmkin inherit from mixed.mmkinJohannes Ranke1-1/+1
With a plot method. The class mixed.mmkin is currently only a virtual class created to unify the plotting method.
2020-11-09Merge plot methods for nlme.mmkin and saem.mmkinJohannes Ranke1-1/+1
This avoids code duplication
2020-11-09Add plot method for saem.mmkin objectsJohannes Ranke1-1/+1
2020-11-09Doc improvementsJohannes Ranke1-1/+1
2020-11-09Some work on example code, pkgdown updateJohannes Ranke1-1/+1
2020-11-09Custom analytical solutions for saemixJohannes Ranke1-1/+1
Currently SFO-SFO and DFOP-SFO. Speed increase factor about 60
2020-11-08The call to saemix.predict fails with DFOP-SFOJohannes Ranke1-1/+1
2020-11-08Update static docsJohannes Ranke1-1/+1

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