aboutsummaryrefslogtreecommitdiff
path: root/docs/dev/reference
AgeCommit message (Collapse)AuthorFilesLines
2022-11-14Update online docsJohannes Ranke27-1691/+1310
2022-11-03Update docsJohannes Ranke3-0/+324
2022-11-01Update online docsJohannes Ranke21-73/+129
2022-10-29Update multistart docsJohannes Ranke10-17/+362
2022-10-26Update multistart example code and vignetteJohannes Ranke5-10/+2
2022-10-26Don't test parhist and llhist on travis, docsJohannes Ranke10-64/+711
2022-09-28Update vignette and static docsJohannes Ranke3-17/+42
2022-09-19Improve parhist and llhistJohannes Ranke1-14/+9
In particular, adapt the display of parameter boxplots for saem fits using mkin transformations to the way used for saem fits using saemix transformations, i.e. always show parameters on the natural scale, and normalised them by dividing by the median from the multiple runs.
2022-09-16Improve multistart documentation, bugfixJohannes Ranke4-22/+360
- Split out llhist and parhist documentation - Add example code for multistart - Create a multistart vignette, because the example code fails when run by pkgdown - Fix multistart for the case of mkin transformations in the saem fit
2022-09-16Improve docs and update pkgdownJohannes Ranke10-366/+474
2022-08-10Change dev branch used for docs, update static docsJohannes Ranke50-3130/+4194
2022-02-28Update docsJohannes Ranke30-16628/+17993
2022-01-11Update static docsnlmixrJohannes Ranke5-9104/+11923
2021-10-05Update docsJohannes Ranke15-1562/+10183
2021-09-29Reduce noise in nlmixr.mmkin output in examplesJohannes Ranke3-4142/+48
2021-09-27intervals() methods, more DFOP/tc variantsJohannes Ranke6-19/+446
2021-09-16Adapt and improve the dimethenamid vignetteJohannes Ranke17-224/+219
Adapt to the corrected data and unify control parameters for saemix and nlmixr with saem. Update docs
2021-08-04Improve AIC table in vignetteJohannes Ranke8-56/+56
2021-07-29Add citations to the DESCRIPTIONJohannes Ranke1-0/+0
2021-07-29Go back to 1.0.x version, update docsJohannes Ranke16-80/+80
2021-07-27Fix dimethenamid vignette problems and update docsJohannes Ranke20-1028/+544
2021-06-22Update development version of online docsJohannes Ranke5-9288/+1014
2021-06-11Finished 'summary.nlmixr.mmkin', checks, docsJohannes Ranke40-431/+15486
2021-03-09Some improvements for borderline casesJohannes Ranke26-251/+288
- fit_with_errors for saem() - test_log_parms for mean_degparms() and saem()
2021-02-15Fully rebuild docs, rerun tests and checkJohannes Ranke109-436/+430
2021-02-13Update docsJohannes Ranke5-31/+31
2021-02-06Reintroduce interface to saemixJohannes Ranke29-403/+433
Also after the upgrade from buster to bullseye of my local system, some test results for saemix have changed.
2021-01-25Change default ylab in plot.mkinfit, explicit ylab for plot.mmkinJohannes Ranke18-33/+27
See NEWS.md. Closes #12
2021-01-11Rebuild docsJohannes Ranke6-56/+66
2020-12-21plot.mixed: Possibility to overlay predictionsJohannes Ranke5-34/+46
2020-12-19Update docsJohannes Ranke3-16/+258
2020-12-16And add the second candidate modelJohannes Ranke1-0/+21
2020-12-16and update docsJohannes Ranke2-20/+17
2020-12-16Add printout of d24 model and update docsJohannes Ranke3-22/+41
2020-12-11Update static docsJohannes Ranke15-135/+399
2020-11-30Complete rebuild of static docs of dev versionJohannes Ranke108-2544/+841
2020-11-27Update static docsJohannes Ranke1-1/+1
2020-11-19Depend on parallel, doc improvementsJohannes Ranke79-820/+2489
By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9.
2020-11-11Update static docsJohannes Ranke5-263/+296
2020-11-11Add print and plot calls to the saem example codeJohannes Ranke11-59/+101
2020-11-10Digits for summary methods, print.saem.mmkinJohannes Ranke3-59/+73
2020-11-09saemix.mmkin and nlme.mmkin inherit from mixed.mmkinJohannes Ranke13-55/+370
With a plot method. The class mixed.mmkin is currently only a virtual class created to unify the plotting method.
2020-11-09Merge plot methods for nlme.mmkin and saem.mmkinJohannes Ranke10-18/+555
This avoids code duplication
2020-11-09Add plot method for saem.mmkin objectsJohannes Ranke7-8/+316
2020-11-09Remove outdated doc pageJohannes Ranke1-1202/+0
2020-11-09Doc improvementsJohannes Ranke1-5/+6
2020-11-09Some work on example code, pkgdown updateJohannes Ranke9-177/+388
2020-11-09Custom analytical solutions for saemixJohannes Ranke2-22/+58
Currently SFO-SFO and DFOP-SFO. Speed increase factor about 60
2020-11-08The call to saemix.predict fails with DFOP-SFOJohannes Ranke1-0/+0
2020-11-08Update static docsJohannes Ranke4-23/+477

Contact - Imprint