Age | Commit message (Collapse) | Author | Files | Lines | |
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2023-04-20 | Fix and rebuild documentation, see NEWS | Johannes Ranke | 1 | -9/+26 | |
I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well. | |||||
2022-11-17 | Complete update of online docs for v1.2.0 | Johannes Ranke | 1 | -9/+26 | |
2022-05-18 | Remove outdated comment in FOCUS L vignette, update docs | Johannes Ranke | 1 | -1/+1 | |
This also adds the first benchmark results obtained on my laptop system | |||||
2022-03-07 | Remove nlmixr interface for release of mkin 1.1.0 | Johannes Ranke | 1 | -1/+1 | |
I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined). | |||||
2022-03-02 | Make tests more platform independent, update docs | Johannes Ranke | 1 | -142/+73 | |
2021-02-15 | Improve README, introductory vignette and some other docsv1.0.3 | Johannes Ranke | 1 | -1/+1 | |
Also bump version to 1.0.3. | |||||
2021-02-03 | Prepare for v1.0.0v1.0.0 | Johannes Ranke | 1 | -2/+2 | |
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest | |||||
2020-10-15 | Update online docs for release version | Johannes Ranke | 1 | -6/+10 | |
2020-05-12 | Update vignettes and docs | Johannes Ranke | 1 | -1/+1 | |
2020-05-12 | Documentation improvements, rebuild static docs | Johannes Ranke | 1 | -9/+9 | |
2020-05-07 | Another overhaul of analytical solutions | Johannes Ranke | 1 | -1/+1 | |
Still in preparation for analytical solutions of coupled models | |||||
2020-05-07 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -26/+43 | |
2019-10-25 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -21/+18 | |
2019-09-18 | Correct and rebuild docs | Johannes Ranke | 1 | -5/+13 | |
- Reconcile docs and code for max_twa_parent - Correct links to docs in twa vignette - Static documentation rebuilt by pkgdown | |||||
2019-07-05 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -1/+1 | |
2019-06-04 | Additional algorithm "d_c", more tests, docs | Johannes Ranke | 1 | -2/+2 | |
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets. | |||||
2019-04-10 | Adapt tests, vignettes and examples | Johannes Ranke | 1 | -1/+1 | |
- Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit | |||||
2019-02-26 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -0/+3 | |
2019-02-25 | Static documentation rebuilt by current pkgdown | Johannes Ranke | 1 | -1/+1 | |
2019-02-21 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -1/+1 | |
2019-01-31 | Restore NAMESPACE | Johannes Ranke | 1 | -1/+1 | |
which was accidentally overwritten by pkgdown -> roxygen | |||||
2019-01-31 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -12/+13 | |
2018-09-18 | Support maximum twa for HS, test, docs | Johannes Ranke | 1 | -1/+1 | |
2018-09-14 | Remove two vignettes from the package but not from docs | Johannes Ranke | 1 | -3/+3 | |
- Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate | |||||
2018-09-14 | Exclude more example code from CRAN checks | Johannes Ranke | 1 | -1/+1 | |
to avoid NOTES about long execution times. Static documentation rebuilt by pkgdown with run_dont_run = TRUE | |||||
2018-09-14 | Static documentation rebuilt by pkgdown | Johannes Ranke | 1 | -1/+1 | |
Also update test log | |||||
2018-07-18 | Correct references to the Rocke and Lorenzato model | Johannes Ranke | 1 | -1/+1 | |
Rename 'sigma_rl' to 'sigma_twocomp' as the Rocke and Lorenzato model assumes lognormal distribution for large y. Rebuild static documentation. | |||||
2018-06-06 | Static documentation rebuilt by pkgdown 1.1.0 | Johannes Ranke | 1 | -7/+24 | |
2018-03-11 | Static docs rebuilt again, with current pkgdown | Johannes Ranke | 1 | -0/+6 | |
2018-03-09 | Another rebuild of the static docs | Johannes Ranke | 1 | -5/+0 | |
Now with rbenchmark installed, to get results for the compiled_models vignette | |||||
2018-03-01 | Static documentation rebuilt using current pkgdown::build_site() | Johannes Ranke | 1 | -9/+15 | |
2017-07-29 | Bump version, update NEWS and rebuild pkdown docsv0.9.46 | Johannes Ranke | 1 | -1/+1 | |
2017-05-05 | Static docs except articles rebuilt with current pkgdown | Johannes Ranke | 1 | -21/+34 | |
2017-03-15 | Static documentation except articles rebuilt by pkgdown | Johannes Ranke | 1 | -2/+7 | |
2016-11-18 | Fix links in README, configure navbar, rebuild docs | Johannes Ranke | 1 | -1/+1 | |
2016-11-18 | Static documentation rebuilt by pkgdown::build_site(run_dont_run = TRUE) | Johannes Ranke | 1 | -6/+21 | |
Again with the jranke branch of jranke/pkgdown | |||||
2016-11-04 | Rebuild docs with updated PR for pkgdown | Johannes Ranke | 1 | -5/+8 | |
2016-11-04 | Static documentation rebuilt by pkgdown::build_site() | Johannes Ranke | 1 | -6/+1 | |
With updated pkgdown with my PR | |||||
2016-11-03 | Static documentation rebuilt by pkgdown::build_site() | Johannes Ranke | 1 | -6/+8 | |
Using pkgdown with PR hadley/pkgdown#212 | |||||
2016-10-26 | Complete pkgdown conf, rerun with current master branch | Johannes Ranke | 1 | -8/+6 | |
2016-10-26 | Static documentation rebuilt by pkgdown::build_site() | Johannes Ranke | 1 | -25/+45 | |
2016-10-06 | Static documentation rebuilt by pkgdown::build_site() | Johannes Ranke | 1 | -0/+132 | |