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2023-05-19Prepare release of v1.2.4v1.2.4Johannes Ranke1-0/+0
- Update DESCRIPTION - Update Makefile to document how to use R-patched - Remove markup from two URLs to avoid CRAN NOTE - Switch two vignettes from html_document to html_vignette to save space in the docs directory, also avoiding a CRAN NOTE - Complete rebuild of pkgdown docs for release
2023-04-20Fix and rebuild documentation, see NEWSJohannes Ranke1-0/+0
I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well.
2022-11-17Complete update of online docs for v1.2.0Johannes Ranke1-0/+0
2022-05-18Remove outdated comment in FOCUS L vignette, update docsJohannes Ranke1-0/+0
This also adds the first benchmark results obtained on my laptop system
2022-03-02Make tests more platform independent, update docsJohannes Ranke1-0/+0
2021-07-27Publication date for 1.0.4 in NEWS, update docsJohannes Ranke1-0/+0
2021-04-21Version 1.0.4 published yesterdayv1.0.4Johannes Ranke1-0/+0
2021-03-31Bug fix in plot.mkinfitJohannes Ranke1-0/+0
In residual plots, use xlab and xlim if appropriate
2021-02-15Improve README, introductory vignette and some other docsv1.0.3Johannes Ranke1-0/+0
Also bump version to 1.0.3.
2021-02-03Prepare for v1.0.0v1.0.0Johannes Ranke1-0/+0
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest
2020-10-15Update online docs for release versionJohannes Ranke1-0/+0
2020-05-27Add docs generated using released version 0.9.52Johannes Ranke1-0/+0
2020-05-12Documentation improvements, rebuild static docsJohannes Ranke1-0/+0
2020-03-30Static documentation rebuilt by pkgdownJohannes Ranke1-0/+0
2019-06-04Additional algorithm "d_c", more tests, docsJohannes Ranke1-0/+0
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets.
2019-05-03Improve error model fittingJohannes Ranke1-0/+0
Now we have a three stage fitting process for nonconstant error models: - Unweighted least squares - Only optimize the error model - Optimize both Static documentation rebuilt by pkgdown
2019-05-02Better initials for error model parametersJohannes Ranke1-0/+0
- Also make it possible to specify initial values for error model parameters. - Run tests - Rebuild docs
2019-04-10Adapt tests, vignettes and examplesJohannes Ranke1-0/+0
- Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit
2018-09-14Exclude more example code from CRAN checksJohannes Ranke1-0/+0
to avoid NOTES about long execution times. Static documentation rebuilt by pkgdown with run_dont_run = TRUE

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