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2019-07-03Update DESCRIPTION, improve NEWSJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2019-06-05Add error model algorithm to outputJohannes Ranke1-2/+2
2019-06-04Additional algorithm "d_c", more tests, docsJohannes Ranke1-4/+4
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets.
2019-05-08Add functionality to plot the error modelJohannes Ranke1-2/+2
by plotting squared residuals against predicted values, and showing the variance function used in the fitted error model. Rebuild docs
2019-05-07Fix hessian calculationsJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2019-05-07After the OLS step, use OLS parameter estimatesJohannes Ranke1-2/+2
- Fix the respective error in the code - Static documentation rebuilt by pkgdown
2019-05-03Improve error model fittingJohannes Ranke1-5/+5
Now we have a three stage fitting process for nonconstant error models: - Unweighted least squares - Only optimize the error model - Optimize both Static documentation rebuilt by pkgdown
2019-05-02Remove reference to archived kinfit packageJohannes Ranke1-2/+2
from vignettes/mkin.Rmd Static documentation rebuilt by pkgdown
2019-05-02Prepare for CRAN releaseJohannes Ranke1-2/+2
- Skip long running tests on CRAN as well to avoid timeout on winbuilder - Don't install benchmark results in the package, they are only needed in the git repository - Don't run example in man/add_err.Rd as it takes > 10 s on winbuilder - Rebuild docs
2019-05-02Better initials for error model parametersJohannes Ranke1-2/+2
- Also make it possible to specify initial values for error model parameters. - Run tests - Rebuild docs
2019-04-10Adapt tests, vignettes and examplesJohannes Ranke1-6/+6
- Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit
2019-03-04Make some example output more reproducibleJohannes Ranke1-2/+2
In order to avoid some unnecessary documentation rebuilds
2019-03-04Review tests and examples based on winbuilder resultsJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2019-02-26Static documentation rebuilt by pkgdownJohannes Ranke1-2/+5
2019-02-26NAFTA SOP Attachment vignetteJohannes Ranke1-2/+2
Also: - Change rounding in print.nafta - Add dots argument to nafta() - Use cores=1 in examples - Restrict N in IORE model to values > 0
2019-02-26Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2019-02-25Static documentation rebuilt by current pkgdownJohannes Ranke1-3/+3
2019-02-25Add plotting tests, add nafta to pkgdownJohannes Ranke1-2/+2
2019-02-22Implement the NAFTA evaluation schemeJohannes Ranke1-2/+2
2019-02-22Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2019-02-21Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
to get the codecov badge into the docs
2019-02-21Static documentation rebuilt by pkgdownJohannes Ranke1-3/+3
2019-02-21Make example logistic fit quietJohannes Ranke1-2/+2
2019-02-21Add the logistic modelJohannes Ranke1-2/+2
2019-01-31Restore NAMESPACEJohannes Ranke1-9/+27
which was accidentally overwritten by pkgdown -> roxygen
2019-01-31Correct title for CAKE_exportJohannes Ranke1-1/+1
Add NEWS entry. Static documentation rebuilt by pkgdown
2019-01-31Static documentation rebuilt by pkgdownJohannes Ranke1-44/+25
2018-11-26Include AIC.mmkin to static docsJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-11-26Add AIC method for mmkin column objectsJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-11-26Further improvement of the logLik.mkinfit helpJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-11-26Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2018-11-26Support logLik and AIC for manual weightsJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-11-23Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2018-11-23Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2018-09-18Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2018-09-18Support maximum twa for HS, test, docsJohannes Ranke1-3/+3
2018-09-14Skip more tests on CRANv0.9.47.5Johannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-09-14Skip some more tests on CRANJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-09-14Update NEWSJohannes Ranke1-2/+2
Static documentation rebuilt by pkgdown
2018-09-14Remove two vignettes from the package but not from docsJohannes Ranke1-5/+5
- Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate
2018-09-14Exclude more example code from CRAN checksJohannes Ranke1-20/+23
to avoid NOTES about long execution times. Static documentation rebuilt by pkgdown with run_dont_run = TRUE
2018-09-14Static documentation rebuilt by pkgdownJohannes Ranke1-1/+1
Also update test log
2018-07-18Correct references to the Rocke and Lorenzato modelJohannes Ranke1-1/+1
Rename 'sigma_rl' to 'sigma_twocomp' as the Rocke and Lorenzato model assumes lognormal distribution for large y. Rebuild static documentation.
2018-06-06Static documentation rebuilt by pkgdown 1.1.0Johannes Ranke1-7/+24
2018-03-21Static documentation rebuilt by pkgdownJohannes Ranke1-1/+3
2018-03-11Static docs rebuilt again, with current pkgdownJohannes Ranke1-0/+6
2018-03-09Another rebuild of the static docsJohannes Ranke1-5/+0
Now with rbenchmark installed, to get results for the compiled_models vignette
2018-03-01Static documentation rebuilt using current pkgdown::build_site()Johannes Ranke1-33/+33
2017-07-29Bump version, update NEWS and rebuild pkdown docsv0.9.46Johannes Ranke1-2/+2
2017-05-05Static docs except articles rebuilt with current pkgdownJohannes Ranke1-43/+48

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