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2023-04-20Fix and rebuild documentation, see NEWSJohannes Ranke1-0/+0
I had to fix the two pathway vignettes, as they did not work with the released version any more. So they and the multistart vignette which got some small fixes as well were rebuilt. Complete rebuild of the online docs with the released version. The documentation of the 'hierarchial_kinetics' format had to be fixed as well.
2022-11-17Complete update of online docs for v1.2.0Johannes Ranke1-0/+0
2022-05-18Remove outdated comment in FOCUS L vignette, update docsJohannes Ranke1-0/+0
This also adds the first benchmark results obtained on my laptop system
2022-03-02Make tests more platform independent, update docsJohannes Ranke1-0/+0
2021-03-31Bug fix in plot.mkinfitJohannes Ranke1-0/+0
In residual plots, use xlab and xlim if appropriate
2021-02-15Improve README, introductory vignette and some other docsv1.0.3Johannes Ranke1-0/+0
Also bump version to 1.0.3.
2021-02-03Prepare for v1.0.0v1.0.0Johannes Ranke1-0/+0
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest
2020-10-15Update online docs for release versionJohannes Ranke1-0/+0
2020-04-15Include random effects in starting parametersJohannes Ranke1-0/+0
- mean_degparms() now optionally returns starting values for fixed and random effects, which makes it possible to obtain acceptable fits also in more difficult cases (with more parameters) - Fix the anova method, as it is currently not enough to inherit from lme: https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17761 - Show fit information, and per default also errmin information in plot.nlme.mmkin() - Examples for nlme.mmkin: Decrease tolerance and increase the number of iterations in the PNLS step in order to be able to fit FOMC-SFO and DFOP-SFO
2019-11-01Fix bug in yesterdays release, add methods for BICJohannes Ranke1-0/+0
2019-10-25Static documentation rebuilt by pkgdownJohannes Ranke1-0/+0
2019-06-04Additional algorithm "d_c", more tests, docsJohannes Ranke1-0/+0
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets.
2019-05-08Add functionality to plot the error modelJohannes Ranke1-0/+0
by plotting squared residuals against predicted values, and showing the variance function used in the fitted error model. Rebuild docs
2018-03-01Static documentation rebuilt using current pkgdown::build_site()Johannes Ranke1-0/+0
2017-09-07Static documentation except articles rebuilt by pkgdownJohannes Ranke1-0/+0
2017-07-29Bump version, update NEWS and rebuild pkdown docsv0.9.46Johannes Ranke1-0/+0
2016-10-26Static documentation rebuilt by pkgdown::build_site()Johannes Ranke1-0/+0

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