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2022-06-30Remove stray sentence from vignette, update docsJohannes Ranke19-28/+32
2022-05-18Remove outdated comment in FOCUS L vignette, update docsJohannes Ranke133-953/+964
This also adds the first benchmark results obtained on my laptop system
2022-04-11Update static docsJohannes Ranke16-12/+34
2022-03-16Use saemix in help page, typo in vignetteJohannes Ranke12-63/+155
2022-03-14Reduce check time for CRAN, releasev1.1.0Johannes Ranke7-17/+21
2022-03-09Fix link to saem.mmkin from READMEJohannes Ranke2-2/+2
Thanks to Uwe Ligges for spotting this inmidst of a lot of ambiguous URL check results.
2022-03-08Avoid using multiple processes on CRAN check machinesJohannes Ranke1-1/+1
2022-03-07Remove nlmixr interface for release of mkin 1.1.0Johannes Ranke94-841/+823
I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined).
2022-03-03Update link to 2,4-D dataJohannes Ranke3-2/+2
2022-03-02Make tests more platform independent, update docsJohannes Ranke217-15445/+31301
2022-02-28Update docsJohannes Ranke56-17941/+18863
2022-02-08Merge branch 'nlmixr'Johannes Ranke231-1671/+16778
2022-01-11Update static docsnlmixrJohannes Ranke20-9255/+12062
2021-10-05Update docsJohannes Ranke17-1569/+10190
2021-10-01Update online docs to 1.0.5Johannes Ranke15-42/+46
2021-09-29Reduce noise in nlmixr.mmkin output in examplesJohannes Ranke4-4143/+49
2021-09-27intervals() methods, more DFOP/tc variantsJohannes Ranke19-64/+684
2021-09-17Put the AIC comparison in a subsubsectionJohannes Ranke2-22/+26
2021-09-16Adapt and improve the dimethenamid vignetteJohannes Ranke38-352/+375
Adapt to the corrected data and unify control parameters for saemix and nlmixr with saem. Update docs
2021-08-04Improve AIC table in vignetteJohannes Ranke10-58/+70
2021-07-29Add citations to the DESCRIPTIONJohannes Ranke3-4/+9
2021-07-29Go back to 1.0.x version, update docsJohannes Ranke23-93/+99
2021-07-29Merge branch 'master' into nlmixrJohannes Ranke3-3/+8
2021-07-29Add publication to README, update docsJohannes Ranke3-3/+8
2021-07-27Fix dimethenamid vignette problems and update docsJohannes Ranke43-1034/+1003
2021-07-27Merge branch 'master' into nlmixrJohannes Ranke23-7/+7
2021-07-27Publication date for 1.0.4 in NEWS, update docsJohannes Ranke23-7/+7
2021-06-22Update development version of online docsJohannes Ranke7-9289/+1018
2021-06-11Finished 'summary.nlmixr.mmkin', checks, docsJohannes Ranke47-456/+15514
2021-04-21Merge branch 'master' into saemixJohannes Ranke120-111/+217
2021-04-21Version 1.0.4 published yesterdayv1.0.4Johannes Ranke16-5/+7
2021-03-31Bug fix in plot.mkinfitJohannes Ranke120-109/+213
In residual plots, use xlab and xlim if appropriate
2021-03-09Some improvements for borderline casesJohannes Ranke32-357/+358
- fit_with_errors for saem() - test_log_parms for mean_degparms() and saem()
2021-02-24Merge branch 'master' into saemixJohannes Ranke2-3/+3
2021-02-24Clarify version status in NEWSJohannes Ranke2-3/+3
2021-02-24Merge branch 'master' into saemixJohannes Ranke13-9/+17
2021-02-24Rebuild docsJohannes Ranke13-9/+17
2021-02-18Merge branch 'master' into saemixJohannes Ranke8-127/+83
2021-02-15Don't let pkgdown add release datesJohannes Ranke2-95/+50
It didn't pick up the release of 1.0.3, and most of the other release dates were duplicated.
2021-02-15Correct grant numbers in README, update docsJohannes Ranke7-33/+34
2021-02-15Fully rebuild docs, rerun tests and checkJohannes Ranke176-703/+983
2021-02-15Merge branch 'master' into saemixJohannes Ranke177-567/+815
2021-02-15Improve README, introductory vignette and some other docsv1.0.3Johannes Ranke177-567/+815
Also bump version to 1.0.3.
2021-02-13Update static docsJohannes Ranke2-6/+16
2021-02-13Rebuild docsJohannes Ranke1-1/+1
2021-02-13Update docsJohannes Ranke11-41/+49
2021-02-13Merge branch 'master' into saemixJohannes Ranke13-10/+18
Run make testcheck to regenerate logs with merge conflicts
2021-02-13Update for gmkin 0.6.12v1.0.2Johannes Ranke13-10/+18
mkinfit: Keep model names stored in mkinmod objects, avoiding their loss in gmkin
2021-02-06Reintroduce interface to saemixJohannes Ranke36-511/+559
Also after the upgrade from buster to bullseye of my local system, some test results for saemix have changed.
2021-02-06Increase test tolerance for parameter comparisonsv1.0.1Johannes Ranke2-1/+2
Platform dependence also revealed after upgrade to bullseye

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