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2021-07-27Publication date for 1.0.4 in NEWS, update docsJohannes Ranke23-7/+7
2021-06-22Update development version of online docsJohannes Ranke7-9289/+1018
2021-06-11Finished 'summary.nlmixr.mmkin', checks, docsJohannes Ranke47-456/+15514
2021-04-21Merge branch 'master' into saemixJohannes Ranke120-111/+217
2021-04-21Version 1.0.4 published yesterdayv1.0.4Johannes Ranke16-5/+7
2021-03-31Bug fix in plot.mkinfitJohannes Ranke120-109/+213
In residual plots, use xlab and xlim if appropriate
2021-03-09Some improvements for borderline casesJohannes Ranke32-357/+358
- fit_with_errors for saem() - test_log_parms for mean_degparms() and saem()
2021-02-24Merge branch 'master' into saemixJohannes Ranke2-3/+3
2021-02-24Clarify version status in NEWSJohannes Ranke2-3/+3
2021-02-24Merge branch 'master' into saemixJohannes Ranke13-9/+17
2021-02-24Rebuild docsJohannes Ranke13-9/+17
2021-02-18Merge branch 'master' into saemixJohannes Ranke8-127/+83
2021-02-15Don't let pkgdown add release datesJohannes Ranke2-95/+50
It didn't pick up the release of 1.0.3, and most of the other release dates were duplicated.
2021-02-15Correct grant numbers in README, update docsJohannes Ranke7-33/+34
2021-02-15Fully rebuild docs, rerun tests and checkJohannes Ranke176-703/+983
2021-02-15Merge branch 'master' into saemixJohannes Ranke177-567/+815
2021-02-15Improve README, introductory vignette and some other docsv1.0.3Johannes Ranke177-567/+815
Also bump version to 1.0.3.
2021-02-13Update static docsJohannes Ranke2-6/+16
2021-02-13Rebuild docsJohannes Ranke1-1/+1
2021-02-13Update docsJohannes Ranke11-41/+49
2021-02-13Merge branch 'master' into saemixJohannes Ranke13-10/+18
Run make testcheck to regenerate logs with merge conflicts
2021-02-13Update for gmkin 0.6.12v1.0.2Johannes Ranke13-10/+18
mkinfit: Keep model names stored in mkinmod objects, avoiding their loss in gmkin
2021-02-06Reintroduce interface to saemixJohannes Ranke36-511/+559
Also after the upgrade from buster to bullseye of my local system, some test results for saemix have changed.
2021-02-06Increase test tolerance for parameter comparisonsv1.0.1Johannes Ranke2-1/+2
Platform dependence also revealed after upgrade to bullseye
2021-02-06Update static docsJohannes Ranke2-90/+91
2021-02-04Documentation improvements, mainly fixing example codeJohannes Ranke21-127/+166
The errors in the example code were in the \dontrun sections, so they were not caught by CRAN checks. In addition, the static help files generated with pkgdown were cached, so I noticed the errors only after completely regenerating the documentation for version 1.0.0.
2021-02-03Prepare for v1.0.0v1.0.0Johannes Ranke177-1690/+4908
- Improve authorship and copyright information - Prepare pkgdown config - Remove dependence on saemix as we need the development version which is not ready for CRAN - Temporarily remove saemix interface to check code coverage of the rest
2021-01-25Change default ylab in plot.mkinfit, explicit ylab for plot.mmkinJohannes Ranke19-34/+28
See NEWS.md. Closes #12
2021-01-11Rebuild docsJohannes Ranke8-64/+86
2020-12-21plot.mixed: Possibility to overlay predictionsJohannes Ranke6-35/+47
2020-12-19Update docsJohannes Ranke5-17/+262
2020-12-16And add the second candidate modelJohannes Ranke2-1/+22
2020-12-16and update docsJohannes Ranke3-21/+18
2020-12-16Add printout of d24 model and update docsJohannes Ranke9-28/+47
2020-12-11Update static docsJohannes Ranke18-137/+405
2020-11-30Complete rebuild of static docs of dev versionJohannes Ranke117-2652/+949
2020-11-27Update static docsJohannes Ranke4-6/+7
2020-11-19Depend on parallel, doc improvementsJohannes Ranke132-1357/+3369
By depending on parallel instead of importing it, functions to set up and stop a cluster are always available when mkin is loaded. The use of multicore processing in mmkin on Windows is now documented in the help file, which brings mkin closer to a version 1.0 #9.
2020-11-11Update static docsJohannes Ranke6-264/+297
2020-11-11Add print and plot calls to the saem example codeJohannes Ranke12-60/+102
2020-11-10Digits for summary methods, print.saem.mmkinJohannes Ranke5-61/+76
2020-11-09saemix.mmkin and nlme.mmkin inherit from mixed.mmkinJohannes Ranke16-60/+375
With a plot method. The class mixed.mmkin is currently only a virtual class created to unify the plotting method.
2020-11-09Merge plot methods for nlme.mmkin and saem.mmkinJohannes Ranke12-23/+557
This avoids code duplication
2020-11-09Add plot method for saem.mmkin objectsJohannes Ranke9-9/+320
2020-11-09Remove outdated doc pageJohannes Ranke1-1202/+0
2020-11-09Doc improvementsJohannes Ranke2-6/+7
2020-11-09Some work on example code, pkgdown updateJohannes Ranke10-178/+389
2020-11-09Custom analytical solutions for saemixJohannes Ranke3-23/+59
Currently SFO-SFO and DFOP-SFO. Speed increase factor about 60
2020-11-08The call to saemix.predict fails with DFOP-SFOJohannes Ranke3-3/+3
2020-11-08Update static docsJohannes Ranke7-24/+482

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