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2022-11-18Make mixed model test data permanent to ensure reproducibilityJohannes Ranke1-2/+2
To ensure that tests on different platforms work on the same data, the mixed modelling test data previosly generated in tests/testthat/setup_script.R were generated once using the script in inst/dataset/generation/ds_mixed.R, and are now distributed with the package.
2022-11-16Update DESCRIPTION and NEWS, check and testJohannes Ranke1-2/+2
2022-11-14Automatic starting parameters for saem.mmkinJohannes Ranke1-2/+2
For the case of mkin transformations. This gives faster convergence, and appears to avoid problems with numeric ODE solutions
2022-11-04Attempt at automatic setting of random effectsJohannes Ranke1-2/+2
Based on parameters in the separate fits that fail the t-test.
2022-11-04Never fail with errors in saem.mmkinJohannes Ranke1-8/+2
I think it is always preferable to be able to investigate the saemix object returned.
2022-11-01Add read_spreadsheetJohannes Ranke1-1/+1
2022-11-01Fix plotting saem fits with covariatesJohannes Ranke1-1/+1
2022-11-01Improved printing for illparms()Johannes Ranke1-3/+3
For the case of single fits and no ill-defined parameters found
2022-10-31Fix R CMD checkJohannes Ranke1-1/+1
2022-10-25Complete documentation and fix a bugJohannes Ranke1-2/+8
The bug was introduced by the changes in summary.saem.mmkin.R and surfaced in the tests when using saemix transformations.
2022-09-28Fix handling of multistart fits with failuresJohannes Ranke1-14/+2
2022-09-16Improve multistart documentation, bugfixJohannes Ranke1-2/+14
- Split out llhist and parhist documentation - Add example code for multistart - Create a multistart vignette, because the example code fails when run by pkgdown - Fix multistart for the case of mkin transformations in the saem fit
2022-07-22Move logs into own directory to clean rootJohannes Ranke1-0/+73

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