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I do not know why the formulae for b1 and b2 on page 64 of FOCUS
kinetics (2014) were not simplified. Clearly, the term
k12 * k21 - (k12 + k1output) * k21)
can be simplified to
- k1output * k21
The test for equivalence of DFOP and SFORB fits verifies that the change
is OK. I also removed trailing whitespaces, substituted tab characters
by two whitespaces and removed indenting of text in paragraphs
describing parameters in roxygen comments to unify formatting.
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- Write the NEWS
- Static documentation rebuilt by pkgdown
- Adapt mkinerrmin
- Fix (hopefully all) remaining problems in mkinfit
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As it is unclear if and when ccSolve will be published on CRAN,
the generation, compilation and use of the C version of the
system of differential equations was developed for mkin, inspired and
guided by the code from the ccSolve package. Many thanks again to
Karline Soetaert for all of her work on this and other R packages.
Now all model types, including the Hockey-Stick model for the parent
compund and the IORE model for parent and/or metabolites can be compiled.
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