Age | Commit message (Collapse) | Author | Files | Lines | |
---|---|---|---|---|---|
2021-01-25 | Change default ylab in plot.mkinfit, explicit ylab for plot.mmkin | Johannes Ranke | 1 | -1/+1 | |
See NEWS.md. Closes #12 | |||||
2020-05-12 | Documentation improvements, rebuild static docs | Johannes Ranke | 1 | -1/+1 | |
2020-05-09 | Avoid the call to merge for analytical solutions | Johannes Ranke | 1 | -0/+1 | |
This increases performance up to a factor of five! | |||||
2020-03-30 | First nlme fits for models with a metabolite | Johannes Ranke | 1 | -15/+40 | |
2019-11-05 | Fix standardized residual plots in 'plot_res' | Johannes Ranke | 1 | -3/+4 | |
2019-11-04 | Scaled residual plots | Johannes Ranke | 1 | -3/+12 | |
2019-10-25 | Use roxygen for functions and methods | Johannes Ranke | 1 | -116/+97 | |
2019-10-22 | Improved visual testing | Johannes Ranke | 1 | -3/+0 | |
2019-10-21 | Improve some plotting routines, more tests | Johannes Ranke | 1 | -3/+12 | |
Static documentation rebuilt by pkgdown | |||||
2019-09-02 | Some changes to improve plots on beamer slides | Johannes Ranke | 1 | -1/+4 | |
2019-06-04 | Additional algorithm "d_c", more tests, docs | Johannes Ranke | 1 | -0/+2 | |
The new algorithm tries direct optimization of the likelihood, as well as a three step procedure. In this way, we consistently get the model with the highest likelihood for SFO, DFOP and HS for all 12 new test datasets. | |||||
2019-05-08 | Add functionality to plot the error model | Johannes Ranke | 1 | -4/+17 | |
by plotting squared residuals against predicted values, and showing the variance function used in the fitted error model. Rebuild docs | |||||
2019-04-10 | Adapt tests, vignettes and examples | Johannes Ranke | 1 | -2/+2 | |
- Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit | |||||
2016-12-07 | Use latex in plots when using tikzDevice | Johannes Ranke | 1 | -0/+4 | |
2016-11-17 | Remove trailing whitespace, clean headers | Johannes Ranke | 1 | -7/+7 | |
Also ignore test.R in the top level directory, as it is not meant to be public | |||||
2016-06-28 | Convenience wrapper plot_sep, further vignette updates | Johannes Ranke | 1 | -0/+5 | |
2016-06-27 | Show chi2 in plot.mkinfit, round with signif | Johannes Ranke | 1 | -2/+10 | |
2016-06-25 | Fix the plot margins for combined plots | Johannes Ranke | 1 | -1/+1 | |
2016-06-25 | Now the old behaviour is restored for compatibility reasons | Johannes Ranke | 1 | -3/+8 | |
When observed variables are not shown in separate plots, the residual plot is shown in the lower third of the total plotting area | |||||
2016-06-25 | Working state, but not backwards compatible | Johannes Ranke | 1 | -18/+31 | |
In this commit, the separatation of plots for observed variables works. The formatting should be improved. However, in gmkin, plotting with show_residuals = TRUE is used, and the GUI expects that the residual plot is below the main plot. This behaviour should be restored. | |||||
2015-10-16 | Full compound names in models that are shown in the plot | Johannes Ranke | 1 | -1/+2 | |
2015-07-20 | Updates and fixes to documentation | Johannes Ranke | 1 | -1/+1 | |
2015-06-29 | Quiet fitting in examples and more links for static docs. | Johannes Ranke | 1 | -1/+1 | |
2015-06-26 | More plotting in help files, fix Make- and .*ignore files | Johannes Ranke | 1 | -6/+4 | |
2014-04-28 | Option to add residual plot to plot.mkinfit | Johannes Ranke | 1 | -2/+12 | |
2014-04-26 | Fix the default case for obs_vars in plot.mkinfit() | Johannes Ranke | 1 | -2/+3 | |
2014-04-26 | Enable selection of observed variables to plot | Johannes Ranke | 1 | -11/+17 | |
2013-03-04 | Small updates of two mkin help files | jranke | 1 | -1/+1 | |
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@73 edb9625f-4e0d-4859-8d74-9fd3b1da38cb | |||||
2013-03-04 | Introduce the possibility to place the legend with mkin using arguments lpos ↵ | jranke | 1 | -1/+7 | |
and inset git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@72 edb9625f-4e0d-4859-8d74-9fd3b1da38cb | |||||
2013-02-18 | - Fix the line types in plot.mkinfit again. | jranke | 1 | -1/+2 | |
git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@64 edb9625f-4e0d-4859-8d74-9fd3b1da38cb | |||||
2013-02-16 | - Some maintenance fixes | jranke | 1 | -1/+1 | |
- Start of the examples vignette git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@61 edb9625f-4e0d-4859-8d74-9fd3b1da38cb | |||||
2012-11-26 | - Added an S3 plot method for mkinfit models | jranke | 1 | -0/+70 | |
- Fixed a bug in the mkinfit summary method which crashed on missing covariance matrices git-svn-id: svn+ssh://svn.r-forge.r-project.org/svnroot/kinfit/pkg/mkin@58 edb9625f-4e0d-4859-8d74-9fd3b1da38cb |