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Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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2020-05-11
Analytical solutions for all SFO variants
Johannes Ranke
1
-27
/
+16
2020-05-11
Don't run visual tests on r-devel for now
Johannes Ranke
1
-14
/
+25
2020-05-11
Avoid merge() and data.frame() in cost function
Johannes Ranke
1
-10
/
+10
2020-05-10
Default to analytical for coupled models if available
Johannes Ranke
1
-10
/
+10
2020-05-09
Avoid the call to merge for analytical solutions
Johannes Ranke
1
-16
/
+17
2020-05-08
We do not need the n.outtimes argument for mkinfit
Johannes Ranke
1
-9
/
+9
2020-05-08
Avoid duplicate merge in tc error model fit
Johannes Ranke
1
-11
/
+11
2020-05-08
Slight performance gain by reducing default n.outtimes
Johannes Ranke
1
-14
/
+14
2020-05-08
Roxygenize, adapt tests
Johannes Ranke
1
-7
/
+7
2020-05-07
Another overhaul of analytical solutions
Johannes Ranke
1
-11
/
+11
2020-05-06
Change implementation of analytical solutions
Johannes Ranke
1
-15
/
+15
2020-04-22
Support SFORB with formation fractions
Johannes Ranke
1
-9
/
+9
2020-04-20
Increase test tolerance for residuals
Johannes Ranke
1
-4
/
+4
2020-04-18
Avoid assignment to .GlobalEnv for CRAN
Johannes Ranke
1
-9
/
+7
2020-04-17
Fix summarizing old objects
Johannes Ranke
1
-7
/
+9
2020-04-16
Increase test coverage
Johannes Ranke
1
-10
/
+10
2020-04-09
Add another visual test for coverage
Johannes Ranke
1
-16
/
+16
2020-04-09
Improve test coverage and fix nlme test
Johannes Ranke
1
-16
/
+16
2020-04-08
Use two assignments to avoid skipping another test
Johannes Ranke
1
-15
/
+11
2020-04-08
Make the nlme test file work with testthat
Johannes Ranke
1
-19
/
+10
2020-04-07
Add some tests for the nlme convenience functions
Johannes Ranke
1
-9
/
+19
2020-04-03
Compiled models article, reduce distractions
Johannes Ranke
1
-15
/
+15
2020-03-31
Use inline documentation for R6 class mkinds
Johannes Ranke
1
-30
/
+15
2020-03-31
Static documentation rebuilt by pkgdown
Johannes Ranke
1
-18
/
+33
2019-11-13
Calculate Akaike weights
Johannes Ranke
1
-10
/
+11
2019-11-09
Add a lack-of-fit test
Johannes Ranke
1
-11
/
+15
2019-11-05
Fix standardized residual plots in 'plot_res'
Johannes Ranke
1
-2
/
+2
2019-11-04
Scaled residual plots
Johannes Ranke
1
-10
/
+10
2019-11-01
Fix bug in yesterdays release, add methods for BIC
Johannes Ranke
1
-12
/
+12
2019-10-31
Reorganize tests to reduce time on winbuilder
Johannes Ranke
1
-10
/
+9
2019-10-31
Add likelihood ratio test and other methods, fixes
Johannes Ranke
1
-7
/
+10
2019-10-28
Fix the cutoff for likelihood based intervals
Johannes Ranke
1
-8
/
+8
2019-10-26
Fix checks and tests
Johannes Ranke
1
-9
/
+9
2019-10-25
Use roxygen for functions and methods
Johannes Ranke
1
-4
/
+4
2019-10-22
Two more plotting tests
Johannes Ranke
1
-4
/
+4
2019-10-22
Go back to d_3 for errmod = "obs"
Johannes Ranke
1
-2
/
+2
2019-10-22
Improved visual testing
Johannes Ranke
1
-5
/
+5
2019-10-21
Fix platform dependence of the correlation matrix
Johannes Ranke
1
-9
/
+5
2019-10-21
Explicit solution_type for FOCUS D in tests
Johannes Ranke
1
-5
/
+9
2019-10-21
Tests all pass locally
Johannes Ranke
1
-1
/
+1
2019-10-21
Improve some plotting routines, more tests
Johannes Ranke
1
-5
/
+5
2019-10-21
Improve tests, remove geometric_mean
Johannes Ranke
1
-10
/
+11
2019-10-21
Refactor mkinfit, infrastructure work
Johannes Ranke
1
-21
/
+21
2019-07-08
Support summarizing older fits
Johannes Ranke
1
-7
/
+8
2019-07-05
Static documentation rebuilt by pkgdown
Johannes Ranke
1
-6
/
+6
2019-07-03
Add check and test logs
Johannes Ranke
1
-6
/
+6
2019-06-05
Adapt tests to new algorithms and output
Johannes Ranke
1
-377
/
+9
2019-06-04
Additional algorithm "d_c", more tests, docs
Johannes Ranke
1
-9
/
+377
2019-05-08
Add functionality to plot the error model
Johannes Ranke
1
-18
/
+13
2019-05-07
Fix hessian calculations
Johannes Ranke
1
-9
/
+14
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