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Fitting kinetic models to chemical degradation data (also on github)
Johannes Ranke
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2020-12-09
Some test fixes
Johannes Ranke
1
-38
/
+7
2020-12-09
Add more tests and fix HS in saem
Johannes Ranke
1
-9
/
+40
2020-12-09
Fix a test I accidentally broke
Johannes Ranke
1
-17
/
+12
2020-12-09
Any yet more tests
Johannes Ranke
1
-14
/
+19
2020-12-09
Fix tests and rerun
Johannes Ranke
1
-28
/
+10
2020-12-08
mixed.mmkin and test coverage
Johannes Ranke
1
-17
/
+23
2020-12-02
Possibility to specify random effects structures
Johannes Ranke
1
-13
/
+9
2020-11-30
Log-Cholesky parameterisation as default in nlme.mmkin
Johannes Ranke
1
-9
/
+13
2020-11-27
Improved way to have persistent DLLs for mkinmod
Johannes Ranke
1
-6
/
+6
2020-11-24
Support storing mkinmod compiled code as CFunc objects
Johannes Ranke
1
-8
/
+8
2020-11-19
Update tests, improve CAKE_export test
Johannes Ranke
1
-20
/
+21
2020-11-08
Improve saem method, add summary
Johannes Ranke
1
-3
/
+3
2020-11-07
Create saem generic for fitting saemix models
Johannes Ranke
1
-14
/
+7
2020-11-06
Fast analytical solutions for saemix, update.mmkin
Johannes Ranke
1
-9
/
+16
2020-11-04
Revert to use starting values for random effects in nlme.mmkin
Johannes Ranke
1
-5
/
+5
2020-10-27
Add summary method for nlme.mmkin objects
Johannes Ranke
1
-10
/
+10
2020-10-08
Fix issues for release
Johannes Ranke
1
-10
/
+10
2020-07-17
mkinfit: Ignore unused components of state.ini
Johannes Ranke
1
-4
/
+5
2020-07-15
Improve handling of (partially) failing fits
Johannes Ranke
1
-5
/
+5
2020-06-15
Test plots on r-devel only
Johannes Ranke
1
-14
/
+25
2020-06-15
Fix a bug, update for current vdiffr
Johannes Ranke
1
-11
/
+11
2020-05-29
Improve handling of warnings, reorganize tests
Johannes Ranke
1
-19
/
+12
2020-05-29
Warn if standardized residuals are unlikely normal
Johannes Ranke
1
-11
/
+18
2020-05-28
use_of_ff = "max" for shorthand models like "SFO"
Johannes Ranke
1
-7
/
+7
2020-05-26
Use all cores per default, confint tolerance
Johannes Ranke
1
-10
/
+10
2020-05-12
Rerun tests and checks, CRAN comments
Johannes Ranke
1
-5
/
+5
2020-05-11
Release to CRAN
v0.9.50.1
Johannes Ranke
1
-3
/
+3
2020-05-11
Add analytical solution for DFOP-SFO
Johannes Ranke
1
-8
/
+8
2020-05-11
Analytical solutions for all SFO variants
Johannes Ranke
1
-27
/
+16
2020-05-11
Don't run visual tests on r-devel for now
Johannes Ranke
1
-14
/
+25
2020-05-11
Avoid merge() and data.frame() in cost function
Johannes Ranke
1
-10
/
+10
2020-05-10
Default to analytical for coupled models if available
Johannes Ranke
1
-10
/
+10
2020-05-09
Avoid the call to merge for analytical solutions
Johannes Ranke
1
-16
/
+17
2020-05-08
We do not need the n.outtimes argument for mkinfit
Johannes Ranke
1
-9
/
+9
2020-05-08
Avoid duplicate merge in tc error model fit
Johannes Ranke
1
-11
/
+11
2020-05-08
Slight performance gain by reducing default n.outtimes
Johannes Ranke
1
-14
/
+14
2020-05-08
Roxygenize, adapt tests
Johannes Ranke
1
-7
/
+7
2020-05-07
Another overhaul of analytical solutions
Johannes Ranke
1
-11
/
+11
2020-05-06
Change implementation of analytical solutions
Johannes Ranke
1
-15
/
+15
2020-04-22
Support SFORB with formation fractions
Johannes Ranke
1
-9
/
+9
2020-04-20
Increase test tolerance for residuals
Johannes Ranke
1
-4
/
+4
2020-04-18
Avoid assignment to .GlobalEnv for CRAN
Johannes Ranke
1
-9
/
+7
2020-04-17
Fix summarizing old objects
Johannes Ranke
1
-7
/
+9
2020-04-16
Increase test coverage
Johannes Ranke
1
-10
/
+10
2020-04-09
Add another visual test for coverage
Johannes Ranke
1
-16
/
+16
2020-04-09
Improve test coverage and fix nlme test
Johannes Ranke
1
-16
/
+16
2020-04-08
Use two assignments to avoid skipping another test
Johannes Ranke
1
-15
/
+11
2020-04-08
Make the nlme test file work with testthat
Johannes Ranke
1
-19
/
+10
2020-04-07
Add some tests for the nlme convenience functions
Johannes Ranke
1
-9
/
+19
2020-04-03
Compiled models article, reduce distractions
Johannes Ranke
1
-15
/
+15
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