| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2022-11-14 | Automatic starting parameters for saem.mmkin | Johannes Ranke | 3 | -1303/+1312 | |
| For the case of mkin transformations. This gives faster convergence, and appears to avoid problems with numeric ODE solutions | |||||
| 2022-10-28 | Rename parhist to parplot and make it generic | Johannes Ranke | 4 | -1/+2 | |
| That parhist name was not the brightest idea, as it does not show histograms. | |||||
| 2022-10-26 | Reduced sfo model for multistart.saem.mkin tests | Johannes Ranke | 2 | -28/+126 | |
| 2022-10-26 | Remove kernel density estimate from llhist | Johannes Ranke | 2 | -17/+81 | |
| 2022-10-26 | Try to make multistart (more) reproducible | Johannes Ranke | 2 | -143/+138 | |
| 2022-10-26 | Make multistart work with testthat scopes | Johannes Ranke | 2 | -0/+257 | |
| Also skip long-running test with saem using the analytical from mkin | |||||
| 2022-10-25 | Change DFOP mixed model data in tests, updates | Johannes Ranke | 1 | -1202/+1202 | |
| 2022-07-21 | Summary method for mmkin objects | Johannes Ranke | 4 | -5038/+1169 | |
| Also, add a method for gathering convergence information and a method for gathering information on ill-defined parameters | |||||
| 2022-07-12 | Tests before releasev1.1.1 | Johannes Ranke | 2 | -0/+3869 | |
| 2022-07-08 | Store DLL info in mkinmod objects for performance | Johannes Ranke | 2 | -1169/+1169 | |
| Thanks to Tomas Kalibera for his analysis of the problem on the r-package-devel mailing list and for the suggestion on how to fix it. See the current benchmark vignette for the new data on mkin 1.1.1 with R 4.2.1, with unprecedented performance. | |||||
| 2022-04-13 | More control of y axes in plot.mkinfit, updates | Johannes Ranke | 4 | -7/+7 | |
| Documentation and test results were updated, the latter with regard to the previous work on plot.mixed.mmkin. | |||||
| 2022-03-07 | Remove nlmixr interface for release of mkin 1.1.0 | Johannes Ranke | 1 | -2193/+2199 | |
| I am postponing my attempts to get the nlmixr interface to CRAN, given some problems with nlmixr using R-devel under Windows, see https://github.com/nlmixrdevelopment/nlmixr/issues/596 and https://github.com/r-hub/rhub/issues/512, which is fixed by the removal of nlmixr from the testsuite. For the tests to be more platform independent, the biphasic mixed effects models test dataset was defined in a way that fitting should be more robust (less ill-defined). | |||||
| 2022-03-02 | Make tests more platform independent, update docs | Johannes Ranke | 1 | -1155/+1163 | |
| 2022-02-09 | Adapt saemix interface to saemix 3.0 on CRAN | Johannes Ranke | 2 | -1445/+1445 | |
| 2021-11-17 | Update required saemix version, update tests | Johannes Ranke | 2 | -1439/+1439 | |
| 2021-07-23 | Merge branch 'master' into nlmixr | Johannes Ranke | 18 | -0/+8459 | |
| After the merge, run make test and accept the new snapshot for the mixed model fit for an nlme object | |||||
| 2021-07-23 | Update vdiffr tests for version 1.0 | Johannes Ranke | 16 | -0/+5246 | |
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index : mkin | |
| Fitting kinetic models to chemical degradation data (also on github) | Johannes Ranke |
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