mkin - Fitting kinetic models to chemical degradation data (also on github)

Age	Commit message (Collapse)	Author	Files	Lines
2018-09-15	Restore test as we removed cor test, bump version	Johannes Ranke	1	-3/+3

2018-09-14	Skip more tests on CRANv0.9.47.5	Johannes Ranke	5	-46/+40
	Static documentation rebuilt by pkgdown
2018-09-14	Skip some more tests on CRAN	Johannes Ranke	3	-7/+6
	Static documentation rebuilt by pkgdown
2018-09-14	Remove two vignettes from the package but not from docs	Johannes Ranke	1	-4/+4
	- Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate
2018-09-13	Enable new error model in gmkin	Johannes Ranke	1	-0/+4
	Also improve the irls fitting of the error model and add a test for FOCUS_2006_C where the second component of the error model is zero
2018-02-06	Skip some tests on CRAN, more quiet examplesv0.9.47.1	Johannes Ranke	3	-40/+37

2018-01-30	Reweighting with two-component error model	Johannes Ranke	1	-0/+46
	Static documentation except articles rebuilt by pkgdown
2017-07-22	Remove this test as results are platform dependent	Johannes Ranke	1	-44/+0
	On my box and winbuilder it was OK, but the CRAN checks show some different behaviour, so the results seem to be too ill-defined for testing for the type of warning. I had skipped this test earlier as it failed on r-forge.
2017-07-21	Fix test_twa (correct "cores" argument")	Johannes Ranke	1	-1/+1

2017-07-21	Only use 1 core to pass test on windows	Johannes Ranke	1	-3/+3

2017-07-21	Limit to one core for checks on windows	Johannes Ranke	1	-1/+1

2017-07-21	Fix tests, try FOMC ill-defined again	Johannes Ranke	3	-32/+34

2016-12-21	TWA calculation for SFO, FOMC and DFOP (parent)	Johannes Ranke	1	-0/+45

2016-06-28	Skip testing for warning for ill-defined FOMC fits	Johannes Ranke	1	-0/+2
	This caused the test suite to fail on r-forge for v0.9.43, obviously no warning was produced in one of the two expectations
2016-04-21	Avoid unnecessary stop in edge case, improve warnings	Johannes Ranke	1	-0/+42
	mkinfit: Do not error out in cases where the fit converges, but the Jacobian for the untransformed model cost can not be estimated. Give a warning instead and return NA for the t-test results. summary.mkinfit: Give a warning message when the covariance matrix can not be obtained. A test has been added to containing such an edge case to check that the warnings are correctly issued and the fit does not terminate.
2015-06-21	Do the t-test for untransformed parametersv0.9-36	Johannes Ranke	1	-0/+28

2015-05-19	Include output in README, use mkinsub() in example code	Johannes Ranke	1	-8/+9

2015-05-15	Make mkinmod quiet in tests	Johannes Ranke	5	-8/+8

2015-05-15	Add synthetic data generated for UBA expertise, tests	Johannes Ranke	2	-1/+68
	The new tests are based on the results documented in the expertise I wrote for the UBA (currently unpublished).
2015-05-15	Relax test tolerance for SFORB, FOCUS B and deSolve	Johannes Ranke	1	-2/+2
	While this was OK on my local windows machine, the test failed on winbuilder
2015-05-15	Make FOMC test for FOCUS A robust towards non-convergence	Johannes Ranke	1	-5/+4

2015-05-15	Also migrate test for mkinpredict	Johannes Ranke	1	-28/+12

2015-05-15	Skip testing FOMC with FOCUS A Windows	Johannes Ranke	1	-9/+15
	Testing the package on winbuilder shows that the Port algorithm does not converge on Windows with this combination, which is not a problem as the FOMC model is not appropriate for the dataset anyways.
2015-05-15	Finished migration from RUnit to testthat	Johannes Ranke	6	-315/+363

2015-05-14	Start of migration from RUnit to testthat	Johannes Ranke	4	-0/+423