Age | Commit message (Collapse) | Author | Files | Lines |
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Static documentation articles rebuilt by pkgdown::build_articles()
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Also ignore test.R in the top level directory, as it is not meant to
be public
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Reducing the size of some figures and switching of retina figures
in the preamble only gives a small decrease in vignette size,
but may be enough to get the size of the doc directory below 5 MB
to avoid the NOTE in the corresponding check (which I did not get
locally, nor on winbuilder using r-devel.
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- Put the CRAN URL that the badge points to into canonical form. I had
missed the requirement to use the canonical form before, as the R CMD
check message complained about a (possibily) invalid URL, so I
overlooked the explanation later in the check log. Thanks to Uwe for
his patience. Fix checked with winbuilder.
- Slightly reduced the build time for the compiled_models vignette by
skipping the warm-up. 3 repetitions are necessary for the autoplot
method to work
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This was accidentally deleted in
438a889c37ffdf8f0c6585092da6abdb63b4575e on June 30!
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r-forge
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Reorganisation of the vignette generation in the Makefile.
Improved YAML header in the R markdown vignettes.
Rebuilt vignettes with the package installed.
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As it is unclear if and when ccSolve will be published on CRAN,
the generation, compilation and use of the C version of the
system of differential equations was developed for mkin, inspired and
guided by the code from the ccSolve package. Many thanks again to
Karline Soetaert for all of her work on this and other R packages.
Now all model types, including the Hockey-Stick model for the parent
compund and the IORE model for parent and/or metabolites can be compiled.
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