Age | Commit message (Collapse) | Author | Files | Lines | |
---|---|---|---|---|---|
2018-03-01 | Static documentation rebuilt using current pkgdown::build_site() | Johannes Ranke | 1 | -2/+2 | |
2018-01-14 | Load mkin quietly in vignettes | Johannes Ranke | 1 | -1/+1 | |
Static documentation articles rebuilt by pkgdown::build_articles() | |||||
2017-07-21 | Fix another URL, vignette builder, rebuild | Johannes Ranke | 1 | -0/+1 | |
2017-07-21 | Reduce vignette sizes | Johannes Ranke | 1 | -8/+2 | |
2017-05-05 | Switch from microbenchmark to rbenchmark | Johannes Ranke | 1 | -37/+37 | |
2016-11-17 | Remove trailing whitespace, clean headers | Johannes Ranke | 1 | -11/+11 | |
Also ignore test.R in the top level directory, as it is not meant to be public | |||||
2016-11-04 | Shorten headings for better look with pkgdown | Johannes Ranke | 1 | -2/+2 | |
2016-10-22 | Update way to specify encoding, improve FOCUS_L TOC | Johannes Ranke | 1 | -1/+1 | |
2016-06-28 | Attempts to reduce vignette size | Johannes Ranke | 1 | -2/+3 | |
Reducing the size of some figures and switching of retina figures in the preamble only gives a small decrease in vignette size, but may be enough to get the size of the doc directory below 5 MB to avoid the NOTE in the corresponding check (which I did not get locally, nor on winbuilder using r-devel. | |||||
2016-06-28 | Convenience wrapper plot_sep, further vignette updates | Johannes Ranke | 1 | -2/+1 | |
2016-03-25 | Remove outdated reference to the inline package | Johannes Ranke | 1 | -2/+1 | |
2016-03-24 | Address feedback from CRAN submission | Johannes Ranke | 1 | -2/+2 | |
- Put the CRAN URL that the badge points to into canonical form. I had missed the requirement to use the canonical form before, as the R CMD check message complained about a (possibily) invalid URL, so I overlooked the explanation later in the check log. Thanks to Uwe for his patience. Fix checked with winbuilder. - Slightly reduced the build time for the compiled_models vignette by skipping the warm-up. 3 repetitions are necessary for the autoplot method to work | |||||
2015-11-13 | Add plots to compiled_models vignette, rebuild staticdocs | Johannes Ranke | 1 | -15/+22 | |
2015-11-09 | Re-add the compiled models vignette | Johannes Ranke | 1 | -0/+101 | |
This was accidentally deleted in 438a889c37ffdf8f0c6585092da6abdb63b4575e on June 30! | |||||
2015-06-30 | Improve calculation of DT90 in endpoints(), check and test | Johannes Ranke | 1 | -101/+0 | |
2015-06-23 | Small documenation changes | Johannes Ranke | 1 | -2/+3 | |
2015-06-22 | Vignettes rebuilt by staticdocs::build_site() for static documentation on ↵ | Johannes Ranke | 1 | -2/+2 | |
r-forge | |||||
2015-06-22 | Version bump, correct benchmark in vignette/compiled_models | Johannes Ranke | 1 | -18/+29 | |
Reorganisation of the vignette generation in the Makefile. Improved YAML header in the R markdown vignettes. Rebuilt vignettes with the package installed. | |||||
2015-06-21 | Rebuild vignettes with the released package installed | Johannes Ranke | 1 | -5/+9 | |
2015-06-20 | Low-level generation of compiled models | Johannes Ranke | 1 | -7/+5 | |
As it is unclear if and when ccSolve will be published on CRAN, the generation, compilation and use of the C version of the system of differential equations was developed for mkin, inspired and guided by the code from the ccSolve package. Many thanks again to Karline Soetaert for all of her work on this and other R packages. Now all model types, including the Hockey-Stick model for the parent compund and the IORE model for parent and/or metabolites can be compiled. | |||||
2015-04-18 | Add a vignette showing the performance of compiled models | Johannes Ranke | 1 | -0/+87 | |