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2020-10-15Reintroduce saemix helper functionsJohannes Ranke1-8/+17
2020-10-08Fix issues for releaseJohannes Ranke1-6/+6
2020-05-26Use all cores per default, confint toleranceJohannes Ranke1-2/+2
Also, use more intelligent starting values for the variance of the random effects for saemix. While this does not appear to speed up the convergence, it shows where this variance is greatly reduced by using mixed-effects models as opposed to the separate independent fits.
2020-05-12Improve documentation, now using a spell checkerJohannes Ranke1-4/+4
2020-05-11Avoid merge() and data.frame() in cost functionJohannes Ranke1-51/+61
also for deSolve and eigenvalue based solutions. This noticeably increases performance for these methods, see test.log and benchmark vignette.
2019-07-05Static documentation rebuilt by pkgdownJohannes Ranke1-2/+2
2019-07-04Update README and introductory vignetteJohannes Ranke1-17/+26
2019-05-02Remove reference to archived kinfit packageJohannes Ranke1-34/+1413
from vignettes/mkin.Rmd Static documentation rebuilt by pkgdown
2018-01-14Load mkin quietly in vignettesJohannes Ranke1-3/+3
Static documentation articles rebuilt by pkgdown::build_articles()
2017-11-16Use html_vignette for FOCUS_D vignette, fix addressv0.9.46.3Johannes Ranke1-12/+7
Static documentation articles rebuilt by pkgdown::build_articles()
2017-07-21Fix another URL, vignette builder, rebuildJohannes Ranke1-1/+2
2017-07-21Recompile to get link in reference rightJohannes Ranke1-9/+13
2016-11-18Change main vignette titleJohannes Ranke1-10/+11
2016-11-17RebuildJohannes Ranke1-5/+5
2016-11-17Add comments to R code in mkin vignetteJohannes Ranke1-13/+23
2016-10-22Update way to specify encoding, improve FOCUS_L TOCJohannes Ranke1-22/+42
2016-09-28Add drat target and rebuild for dratJohannes Ranke1-0/+355
2016-09-10Static documentation rebuilt with current staticdocsJohannes Ranke1-349/+0
Using hadley/staticdocs commit #8c1069d from 8 days ago
2016-09-10Static documentation rebuilt by staticdocs::build_site()Johannes Ranke1-6/+8
2016-06-28Static documentation rebuilt by staticdocs::build_site()Johannes Ranke1-8/+2
2016-06-28Attempts to reduce vignette sizeJohannes Ranke1-3/+9
Reducing the size of some figures and switching of retina figures in the preamble only gives a small decrease in vignette size, but may be enough to get the size of the doc directory below 5 MB to avoid the NOTE in the corresponding check (which I did not get locally, nor on winbuilder using r-devel.
2016-06-28Avoid multicore fits in vignettes for passing CRAN checksJohannes Ranke1-4/+3
Also a small fix to the FOCUS Z vignette, and an update of the static documentation generated by staticdocs.
2016-06-27Complete mkin vignette, update FOCUS L vignetteJohannes Ranke1-13/+60
The mkin vignette now describes how confidence intervals and the t-test are calculated. The FOCUS L vignette is updated with the new floating toc provided by the current rmarkdown package, and also uses current, improved mkin functionality.
2016-06-24Convert main vignette to Rmd/html, add_err(), fixesJohannes Ranke1-0/+301

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