| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2023-02-13 | WIP adapting to new deSolve with faster lsoda | Johannes Ranke | 1 | -16/+83 | |
| 2023-01-09 | Prebuilt PDF vignettes, summary_listing | Johannes Ranke | 1 | -21/+172 | |
| 2022-07-14 | Improve readability of benchmark code shown in vignette | Johannes Ranke | 1 | -17/+23 | |
| 2022-07-12 | Rerun benchmarks on desktop computer | Johannes Ranke | 1 | -11/+40 | |
| 2022-07-08 | Store DLL info in mkinmod objects for performance | Johannes Ranke | 1 | -12/+41 | |
| Thanks to Tomas Kalibera for his analysis of the problem on the r-package-devel mailing list and for the suggestion on how to fix it. See the current benchmark vignette for the new data on mkin 1.1.1 with R 4.2.1, with unprecedented performance. | |||||
| 2022-07-01 | Rerun benchmarks with R 4.2.1 and openblas-serial | Johannes Ranke | 1 | -11/+11 | |
| After confirming that lapack versus atlas versus openblas results are quite similar, and therefore not responsible for the differences between R 4.1.3 and R 4.2.1 | |||||
| 2022-07-01 | Add benchmarks on laptop with R 4.1.3 and 4.2.1 | Johannes Ranke | 1 | -45/+74 | |
| 2022-07-01 | Add R version to data in benchmark vignette | Johannes Ranke | 1 | -0/+2190 | |
| 2022-05-18 | Remove outdated comment in FOCUS L vignette, update docs | Johannes Ranke | 1 | -2005/+0 | |
| This also adds the first benchmark results obtained on my laptop system | |||||
| 2021-02-15 | Improve README, introductory vignette and some other docsv1.0.3 | Johannes Ranke | 1 | -20/+122 | |
| Also bump version to 1.0.3. | |||||
| 2020-05-13 | Further formatting improvement of benchmark vignette | Johannes Ranke | 1 | -80/+56 | |
| Also, use .rmd extension instead of .Rmd for vignettes. | |||||
| 2020-05-12 | Improve formatting of benchmark vignette | Johannes Ranke | 1 | -30/+168 | |
| 2020-05-12 | Update vignettes and docs | Johannes Ranke | 1 | -97/+82 | |
| 2020-05-11 | Avoid merge() and data.frame() in cost function | Johannes Ranke | 1 | -11/+11 | |
| also for deSolve and eigenvalue based solutions. This noticeably increases performance for these methods, see test.log and benchmark vignette. | |||||
| 2020-05-10 | Default to analytical for coupled models if available | Johannes Ranke | 1 | -131/+112 | |
| This revealed that transforming rates is necessary for fitting the analytical solution of the SFO-SFO model to the FOCUS D dataset. Benchmarks show that fitting coupled models with deSolve got a bit slower through the latest changes | |||||
| 2019-05-02 | Prepare for CRAN release | Johannes Ranke | 1 | -27/+33 | |
| - Skip long running tests on CRAN as well to avoid timeout on winbuilder - Don't install benchmark results in the package, they are only needed in the git repository - Don't run example in man/add_err.Rd as it takes > 10 s on winbuilder - Rebuild docs | |||||
| 2019-04-10 | Adapt tests, vignettes and examples | Johannes Ranke | 1 | -0/+1817 | |
| - Write the NEWS - Static documentation rebuilt by pkgdown - Adapt mkinerrmin - Fix (hopefully all) remaining problems in mkinfit | |||||
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index : mkin | |
| Fitting kinetic models to chemical degradation data (also on github) | Johannes Ranke |
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