Age | Commit message (Collapse) | Author | Files | Lines |
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Thanks to Tomas Kalibera for his analysis of the problem on the
r-package-devel mailing list and for the suggestion on how to
fix it. See the current benchmark vignette for the new data
on mkin 1.1.1 with R 4.2.1, with unprecedented performance.
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After confirming that lapack versus atlas versus openblas results are
quite similar, and therefore not responsible for the differences
between R 4.1.3 and R 4.2.1
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This also adds the first benchmark results obtained on my laptop system
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Also bump version to 1.0.3.
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Also, use .rmd extension instead of .Rmd for vignettes.
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also for deSolve and eigenvalue based solutions. This noticeably increases
performance for these methods, see test.log and benchmark vignette.
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This revealed that transforming rates is necessary for fitting
the analytical solution of the SFO-SFO model to the FOCUS D dataset.
Benchmarks show that fitting coupled models with deSolve got a bit
slower through the latest changes
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- Skip long running tests on CRAN as well to avoid timeout on winbuilder
- Don't install benchmark results in the package, they are only needed
in the git repository
- Don't run example in man/add_err.Rd as it takes > 10 s on winbuilder
- Rebuild docs
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- Write the NEWS
- Static documentation rebuilt by pkgdown
- Adapt mkinerrmin
- Fix (hopefully all) remaining problems in mkinfit
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