mkin - Fitting kinetic models to chemical degradation data (also on github)

Age	Commit message (Collapse)	Author	Files	Lines
2020-05-12	Update vignettes and docs	Johannes Ranke	1	-43/+38

2020-04-03	Compiled models article, reduce distractions	Johannes Ranke	1	-81/+108
	- Added a section with platform specific notes on getting compiled models to work to the compiled models article - Don't return empty SFORB parameter list from endpoints() if there is no SFORB model - Avoid warnings when using standardized = TRUE in plot.mmkin()
2019-04-04	Direct error model fitting works	Johannes Ranke	1	-13/+79
	- No IRLS required - Removed optimization algorithms other than Port - Removed the dependency on FME - Fitting the error model 'obs' is much faster for the FOCUS_2006_D dataset and the FOMC_SFO model (1 second versus 3.4 seconds) - Vignettes build slower. Compiled models needs 3 minutes instead of 1.5 - For other vignettes, the trend is less clear. Some fits are faster, even for error_model = "const". FOCUS_Z is faster (34.9 s versus 44.1 s) - Standard errors and confidence intervals are slightly smaller - Removed code for plotting during the fit, as I hardly ever used it - Merged the two cost functions (using transformed and untransformed parameters) into one log-likelihood function
2018-09-14	Remove two vignettes from the package but not from docs	Johannes Ranke	1	-0/+1661
	- Rebuild static documentation - Adapt test to new approach to two component error model where the model is inadequate